Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_P01
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0626 + 9950100-9950269,9950387-9950516,9950616-9950684           35   0.10 
08_01_0074 + 530207-532603                                             34   0.18 
08_01_0054 - 367770-370166                                             33   0.41 
11_01_0249 - 1913739-1914755                                           29   5.1  
12_01_0248 - 1841454-1841820,1842223-1842728                           29   6.7  

>03_02_0626 + 9950100-9950269,9950387-9950516,9950616-9950684
          Length = 122

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
 Frame = +1

Query: 217 RYGVPFILFVVGGSFGL-----------REWTQIRYQFSQLKGVSKEEAEKMGLHREKTV 363
           RYG+P I   V G+ GL           +E   + ++  +            G ++ K +
Sbjct: 34  RYGLPLISLTVFGAVGLAHLIQGSKEVTKEKEDMEWEVVETTKALSRTGPVEGAYKPKKL 93

Query: 364 SLDTAYEEIQ-KLDIDNWENKRGPRPWE 444
           SL+   + +Q K+DI+N++ KR PRP E
Sbjct: 94  SLEDELKALQQKVDINNYDYKRIPRPNE 121


>08_01_0074 + 530207-532603
          Length = 798

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = -3

Query: 269 LKPNDPPTTNNINGTPYLKVLRLLMAINVFRMLSTRAVNPVVIIFS 132
           +KPN+      ING  Y K  R+  A ++FR ++++ VNP ++I+S
Sbjct: 517 VKPNEVTYNTIING--YCKNGRIEDACSLFRQMASKGVNPGIVIYS 560


>08_01_0054 - 367770-370166
          Length = 798

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = -3

Query: 269 LKPNDPPTTNNINGTPYLKVLRLLMAINVFRMLSTRAVNPVVIIFS 132
           +KPN+      ING  Y K  R+  A ++FR ++++ VNP ++ +S
Sbjct: 549 VKPNEVTYNTMING--YCKNGRIEDAFSLFRQMASKGVNPGIVTYS 592


>11_01_0249 - 1913739-1914755
          Length = 338

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = -1

Query: 418 FPNYQYPIFVFLHMQYPKKQFFLCEGPFSLLLPYSHLLIVKTDI*FVSIPSNQTILLQQI 239
           FP        F + ++P   +   EG  S ++  SHL    TDI  V+ P + T  L+ +
Sbjct: 34  FPTAPNSSTSFTYSRHPDGWYTFPEGVVSAMVIKSHLTARTTDIFMVTFPKSGTTWLKAL 93

Query: 238 I*TEHH 221
           + +  H
Sbjct: 94  LHSALH 99


>12_01_0248 - 1841454-1841820,1842223-1842728
          Length = 290

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -1

Query: 388 FLHMQYPKKQFFLCEGPFSLLLPYSHLLIVKTDI*FVSIPSNQTILLQQII*TEHH 221
           F + ++P   +   EG  S ++  SHL    TDI  V+ P + T  L+ ++ +  H
Sbjct: 44  FTYSRHPDGWYTFPEGVVSAMVIKSHLTARTTDIFMVTFPKSGTTWLKTLLHSALH 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,721,415
Number of Sequences: 37544
Number of extensions: 275136
Number of successful extensions: 469
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)