Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_O24
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 373 e-104
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 210 2e-55
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 208 6e-55
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 190 3e-49
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 41 3e-04
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 36 0.008
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 0.39
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 30 0.52
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.52
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 29 1.2
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 3.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 4.8
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 4.8
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 4.8
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 26 6.4
SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccha... 26 6.4
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 373 bits (918), Expect = e-104
Identities = 169/252 (67%), Positives = 199/252 (78%)
Frame = +3
Query: 120 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 299
MREIVH+QAGQCGNQ+GA FW I+DEHG+D G YHG S+ Q ER+NVY+NEA+GGKYV
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGGKYV 60
Query: 300 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 479
PRA+LVDLEPGTMD+V+SG FG +FRPDN ++GQSGAGN WAKGHYTEGAEL D+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVV 120
Query: 480 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 659
R+E+E+CD LQGFQ KIREEYPDR+M T+SV P+PK SDTVV
Sbjct: 121 RREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVV 180
Query: 660 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTLAF 839
EPYNATLS+HQLVEN+DET+CIDNEAL I TLK+ +P+Y DL HLVS M+GVT +F
Sbjct: 181 EPYNATLSMHQLVENSDETFCIDNEALSSIFANTLKIKSPSYDDLNHLVSAVMAGVTTSF 240
Query: 840 RFPGSVER*SRK 875
RFPG + RK
Sbjct: 241 RFPGELNSDLRK 252
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 210 bits (513), Expect = 2e-55
Identities = 99/252 (39%), Positives = 149/252 (59%), Gaps = 6/252 (2%)
Frame = +3
Query: 120 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTG------AYHGDSDLQLERINVYYNEA 281
MRE++ + GQ G QIG WE+ EHGI P G H ++ + +++E
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSET 60
Query: 282 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 461
GK+VPR+I VDLEP +D VR+GP+ +F P+ V G+ A NN+A+GHYT G E++D
Sbjct: 61 GQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMID 120
Query: 462 SVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 641
SVL+ +R+ +++C LQGF ++ EY + +SV P+P+
Sbjct: 121 SVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVYPAPQ 180
Query: 642 VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMS 821
VS +VVEPYN+ L+ H ++N+D T+ +DNEA YDIC R L + PTY +L L++ +S
Sbjct: 181 VSTSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDICRRNLDIERPTYENLNRLIAQVVS 240
Query: 822 GVTLAFRFPGSV 857
+T + RF GS+
Sbjct: 241 SITASLRFAGSL 252
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 208 bits (509), Expect = 6e-55
Identities = 98/248 (39%), Positives = 146/248 (58%), Gaps = 2/248 (0%)
Frame = +3
Query: 120 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER--INVYYNEASGGK 293
MREI+ + GQ G QIG WE+ EHGI P G + ++ Q + +++E GK
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 294 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 473
YVPR+I VDLEP +D VR+GP+ +F P+ + G+ A NN+A+GHYT G ELVD V D
Sbjct: 61 YVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTD 120
Query: 474 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 653
+R+ +++C LQGF ++ EY + +SV P+P+VS +
Sbjct: 121 KIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTS 180
Query: 654 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTL 833
VVEPYN+ L+ H ++ D T+ +DNE+ YDIC R L + P+Y +L L++ +S +T
Sbjct: 181 VVEPYNSVLTTHATLDLADCTFMVDNESCYDICRRNLDIERPSYENLNRLIAQVVSSITA 240
Query: 834 AFRFPGSV 857
+ RF GS+
Sbjct: 241 SLRFEGSL 248
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 190 bits (462), Expect = 3e-49
Identities = 91/246 (36%), Positives = 142/246 (57%), Gaps = 3/246 (1%)
Frame = +3
Query: 123 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 302
REI+ LQAGQCGNQIG++FW+ + EHGI P G + ++R +V++ ++ +Y+P
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDDTRYIP 62
Query: 303 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELVDSVLDV 476
RAIL+DLEP ++++ S +G ++ P+N + ++ GAGNNWA G Y+ + + ++D+
Sbjct: 63 RAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDM 121
Query: 477 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP-SPKVSDT 653
+ +E++ D L+GF ++ + YP +I+ TYSV P S VSD
Sbjct: 122 IDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDV 181
Query: 654 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTL 833
VV+PYN+ L++ +L N D +DN AL I L PT+ LVS MS T
Sbjct: 182 VVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTT 241
Query: 834 AFRFPG 851
R+PG
Sbjct: 242 TLRYPG 247
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 40.7 bits (91), Expect = 3e-04
Identities = 37/136 (27%), Positives = 69/136 (50%)
Frame = +1
Query: 361 SDRSSVRTTSFSDSPAPATTGPRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSV 540
S S++ ++S S S P+T+ +T LSS + SS S+ + + +I +S+ S
Sbjct: 225 SSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSS----SS 280
Query: 541 AAPGPVWAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPT 720
++P + SS S S+PT + + T S + SS T+ S +S + PT
Sbjct: 281 SSPTSTSSTISSSSSSSSSPTST-SSTISSSSSSSSSFSS--TLSSSSMSSSSSFSSSPT 337
Query: 721 ASTTRLYTTSASALSN 768
+S++ + ++S+S S+
Sbjct: 338 SSSSTISSSSSSPSSS 353
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 35.9 bits (79), Expect = 0.008
Identities = 30/129 (23%), Positives = 64/129 (49%)
Frame = +1
Query: 370 SSVRTTSFSDSPAPATTGPRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAP 549
+ V T+ S S +TT ++ SS T ++ S+ + + + + +S+ S ++
Sbjct: 120 NGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSS 179
Query: 550 GPVWAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTAST 729
+ SSS S S+ + S + + S P + SS+H+ S +S + ++P++S+
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSS-SSSSSRPSSSS 238
Query: 730 TRLYTTSAS 756
+ + T S+S
Sbjct: 239 SFITTMSSS 247
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.3 bits (65), Expect = 0.39
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 382 TTSFSDSPAPATTGPRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVW 561
TTS++ + + A++ ++ SSLT SS ++ + N + ++ + S +A
Sbjct: 60 TTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSL 119
Query: 562 APSS-SQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRL 738
A SS + S+ S+ S + S SS + L+ ++ T PT+S T
Sbjct: 120 ASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATS- 178
Query: 739 YTTSASALSN 768
+ S++A SN
Sbjct: 179 SSLSSTAASN 188
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 29.9 bits (64), Expect = 0.52
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = +1
Query: 424 PRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVWAPSSSQRSVKSTPT 603
PR++T++ L S++ S S+ Q + +S L+ PS AP P + SSS T
Sbjct: 219 PRESTEKPLLSVSALSS-SSHLQPTSATSSSSRLY-PSRPAPTPPASSSSSPLLSSQTVK 276
Query: 604 ES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRL 738
+ ++ P P + S+++ +R S L QT T+ T +
Sbjct: 277 TTTSNASRQPSPLVSSKSTDNIIR-SHSPVLLTPQTLSTSETKHI 320
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.52
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Frame = +1
Query: 382 TTSFSDSPAPAT-TGPRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPV 558
+TS + P P T T DT L + + S S ++ +S+L P + P
Sbjct: 142 STSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTST---SIPPTGGSSSLSTP-ITPTVPP 197
Query: 559 WAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRL 738
+ SS+ + T T S T T SP P T + T + +S L T PT T
Sbjct: 198 TSTSSTSIPIPPTSTSS-TDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTST 256
Query: 739 YTTS 750
+TS
Sbjct: 257 SSTS 260
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +1
Query: 370 SSVRTTSFSDSPAPATTGPRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAP 549
SS T+SFSD A + P+ T+ T S++ S + N ++ N PS P
Sbjct: 132 SSPATSSFSDPKAFSAGVPKFTSD------TSSTVSSTPSLNHSL----QNSMPPSTPTP 181
Query: 550 GPVWAPS 570
PVWAP+
Sbjct: 182 PPVWAPT 188
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 423 AKGHYTEGAELVDSVLDVVRKESESCDCLQ 512
A+GH G ELV + D +RK+SE+ L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 159 NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERI 260
N++G E+++++ +DPT A + DLQ++ +
Sbjct: 133 NELGENEEEVLTEQKQLDPTLAAKKELDLQMDAV 166
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 4.8
Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 2/132 (1%)
Frame = +1
Query: 379 RTTSFSDSPAPATTGPRDTTQRVLSSLTRSSM*SAKNQNLAIAYR-ASNLHIPSVAAPGP 555
R SF PA + PR S + M N ++ AY+ + L P++ A
Sbjct: 627 RQYSFQPRPATPSNPPRSLPPP--SGQVNAPMSQTPNP-ISFAYQHGTPLATPTMRANSF 683
Query: 556 VWAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKT-QTKPTASTT 732
P+SS ++ T + HT PK T +S H M S + P+
Sbjct: 684 NSYPASSAEPIRRPATTTVGHTPNLYSPKTNTYNSRH-MAYEMTKSHINVISPGPSLQVN 742
Query: 733 RLYTTSASALSN 768
YT ++ L N
Sbjct: 743 APYTPTSGELGN 754
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 354 GPFGQIFRPDNFVFGQSGAG-NNWAKGHYTEGAEL 455
GP+G +F P F+F +G NW+ Y E A L
Sbjct: 157 GPYGTMFLPQQFIFDSNGRPLLNWSY-LYKEHAHL 190
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 361 SDRSSVRTTSFSDSPAPATTGPRDTTQRVLSSLTRSSM*SA 483
S SS T+ S + + T P ++ V+SS++ SSM S+
Sbjct: 342 SSSSSASATATSSAESSIATSPITSSSNVVSSISTSSMDSS 382
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 496 LAIAYRASNLHIPSVAAPGPVWAPSSSQRSVK 591
LA+ Y + + +V APG +W+P+ +R K
Sbjct: 159 LAVRYGPLGIRV-NVCAPGTIWSPAWDERFKK 189
>SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 103 KITYTK*GKSFIYRPANVV 159
+I+YT G SFIYRP N++
Sbjct: 64 EISYT--GTSFIYRPGNII 80
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,505,187
Number of Sequences: 5004
Number of extensions: 72427
Number of successful extensions: 244
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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