Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_O22
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical pr...    31   0.80 
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    31   0.80 
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    29   3.2  
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    29   4.3  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     29   4.3  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     29   4.3  
Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z75533-8|CAA99821.1|  464|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF099003-1|AAC68742.1|  440|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical p...    28   9.8  

>Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical
           protein C46C2.6a protein.
          Length = 195

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +1

Query: 220 CPKNTEHRARHAGKCACCPACVTLLDEGATC-KIYSKELGETPSAVCKK-PLKC 375
           CP + +   +H+G+CA   AC+     G  C K++S ++  T    CK  P+ C
Sbjct: 60  CPSDYDFIRQHSGRCADGTACIPDSSFGEPCIKLFSYQM--TKKFCCKSDPIDC 111


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 13/80 (16%)
 Frame = +1

Query: 196 PCIQPPLVCPKNTEHRARHAGKC---ACCPACVTLLDE----------GATCKIYSKELG 336
           P    P V P + +H   H  KC     CP C  L ++             C I S   G
Sbjct: 637 PVCSQPCVRPHSCDHSVSH--KCHGEQNCPPCTQLTEKMCYGGHRVRKNIPCHIDSVSCG 694

Query: 337 ETPSAVCKKPLKCIKRVCTK 396
                VCKKPLKC   VC +
Sbjct: 695 ----VVCKKPLKCGVHVCQR 710


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +1

Query: 172 GTDYCEKNPCIQPPLVCPKNTEHRARHAGKCA-CCPACVTLLDEGATCKIYSKELGETPS 348
           G D C    C   P  CP N     R +G C  CCP   T ++ G  C + S   G    
Sbjct: 530 GVD-CNNGACCPLP-TCPNNIASSQRCSGGCTNCCPVGQTCMN-GGCCDLPSCPSGGFAI 586

Query: 349 AVC 357
           ++C
Sbjct: 587 SMC 589


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 226 KNTEHRARHAGKCACCPACVTLLDEGA 306
           K T HR +H    ACCP C  ++   A
Sbjct: 147 KGTWHRVKHVVFVACCPPCCCIIQRSA 173


>Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical
           protein K05D4.3 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 470 IIFRTGRDRSIESLYFPANENYYIILVQTLLMHLRGF 360
           ++FR+ R R   +  FP  +++Y  +V+T ++H  GF
Sbjct: 47  VVFRSNRQRDRSTPIFPIIKHFYSTVVRTYILHF-GF 82


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
           protein F48E3.8a protein.
          Length = 2427

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +1

Query: 139 VASAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLDEGATCKI 318
           V     GAL  GT     +  IQ  + CP    +  R AG       C+T+   G  C+ 
Sbjct: 58  VCQCVKGALNTGTTCIASSTAIQTSVACPAGQTY-IREAG------VCMTVQQPGEPCQ- 109

Query: 319 YSKELGE-TPSAVCKKPLKC 375
           YS++     P A C K ++C
Sbjct: 110 YSQQCSALEPGAYCLK-MRC 128


>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
           protein F48E3.8b protein.
          Length = 1299

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +1

Query: 139 VASAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLDEGATCKI 318
           V     GAL  GT     +  IQ  + CP    +  R AG       C+T+   G  C+ 
Sbjct: 58  VCQCVKGALNTGTTCIASSTAIQTSVACPAGQTY-IREAG------VCMTVQQPGEPCQ- 109

Query: 319 YSKELGE-TPSAVCKKPLKC 375
           YS++     P A C K ++C
Sbjct: 110 YSQQCSALEPGAYCLK-MRC 128


>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +1

Query: 172 GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLDEGATCKIYSKELGETPS 348
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 302 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 360

Query: 349 AVC 357
            +C
Sbjct: 361 GIC 363


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +1

Query: 172 GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLDEGATCKIYSKELGETPS 348
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 244 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 302

Query: 349 AVC 357
            +C
Sbjct: 303 GIC 305


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +1

Query: 172 GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLDEGATCKIYSKELGETPS 348
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 426 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 484

Query: 349 AVC 357
            +C
Sbjct: 485 GIC 487


>Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical
           protein ZK1010.4 protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 109 TLIFILLVA--CVASAAYGALVCGTDYCEKNPCI 204
           T IF++LVA   V  A   + VCG+ YC   P +
Sbjct: 5   TTIFLVLVAGAVVTEACLSSGVCGSSYCAAPPAV 38


>Z75533-8|CAA99821.1|  464|Caenorhabditis elegans Hypothetical
           protein C54G4.9 protein.
          Length = 464

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 45  FSILTCTQDYYEKRIQKFQNEN 110
           FSILTCT    E RI +F  EN
Sbjct: 443 FSILTCTYKNAEDRILEFMKEN 464


>AF099003-1|AAC68742.1|  440|Caenorhabditis elegans Hypothetical
           protein Y59C2A.2 protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 805 NAEKPPTPPPDXEHKMN 755
           NA+ PP PPP  +H+ N
Sbjct: 48  NAQNPPNPPPHTQHQHN 64


>Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -2

Query: 194 FFSQ*SVPHTKAPYAADATHATSNIKINVFILKFLNTFLVIVLSAS*NTESNLKEFPIVS 15
           +F   S   T+  Y+       + I++ + IL  +    +IV   +   E NL  FPIVS
Sbjct: 9   WFQNFSEQFTRIKYSVHEMQQNNFIRVLLSILIIIFPLYIIVYRKNRKREKNLPTFPIVS 68


>Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -2

Query: 194 FFSQ*SVPHTKAPYAADATHATSNIKINVFILKFLNTFLVIVLSAS*NTESNLKEFPIVS 15
           +F   S   T+  Y+       + I++ + IL  +    +IV   +   E NL  FPIVS
Sbjct: 9   WFQNFSEQFTRIKYSVHEMQQNNFIRVLLSILIIIFPLYIIVYRKNRKREKNLPTFPIVS 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,782,561
Number of Sequences: 27780
Number of extensions: 349308
Number of successful extensions: 984
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)