Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_O22
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   4.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.8  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   6.3  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   6.3  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   8.4  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 85  VFKNFKMKTLIFILLVACVASAAYGAL 165
           +FK FK +  +++L+ AC+    +  L
Sbjct: 431 LFKTFKDRKYLYMLMEACLGGELWTVL 457


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 458 FEI*FVYGVKLIIICTV 508
           + I F Y + LI++CTV
Sbjct: 816 YMIAFAYPIMLIVVCTV 832


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 304 HLHQVKLHKRDNKHTFQRVWRDAQ 233
           ++ +VK  K  +KH  Q  W D +
Sbjct: 325 YIPKVKNKKAGSKHLLQNTWLDPE 348


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 352 VCKKPLKCIKRVCTKI 399
           + K PL+C+ R CT +
Sbjct: 106 ITKAPLECMCRPCTSV 121


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +1

Query: 223 PKNTEHRARHAGKCACCPACVTLLDEGATCKIYSKELGETPSAV 354
           P N    A  A KCA       L  E A C+   K +  +P  V
Sbjct: 153 PMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVISISPDLV 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,442
Number of Sequences: 438
Number of extensions: 3885
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)