Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_O20
         (1031 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   4.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   7.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   7.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   7.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   7.8  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 322 YNREIFNDDRGQLTGHXYGTXLL*PGRDSXNYGG 423
           Y + ++  D+  +TG  YG   + PG+ S  + G
Sbjct: 60  YKQRVY--DKNGMTGDAYGGLNIRPGQPSRQHAG 91


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +2

Query: 167 YTGLLITKXNTPSEA--YFQSD 226
           YTG  +TK N P +   YF  D
Sbjct: 204 YTGWYLTKHNVPEQRLNYFTED 225


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 92  CRCWLVKFNDXSKSLE 45
           CR WL KF   SK ++
Sbjct: 401 CRSWLSKFPTRSKRID 416


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 92  CRCWLVKFNDXSKSLE 45
           CR WL KF   SK ++
Sbjct: 401 CRSWLSKFPTRSKRID 416


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +2

Query: 167 YTGLLITKXNTPSEA--YFQSD 226
           YTG  +TK N P +   YF  D
Sbjct: 204 YTGWYLTKHNVPEQRLNYFTED 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,977
Number of Sequences: 438
Number of extensions: 3539
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 34467615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)