Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_O19
(1220 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.23
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 2.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 2.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 24 5.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.7
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 8.8
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 8.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 8.8
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.9 bits (74), Expect = 0.23
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +1
Query: 985 PXPPPXPPPXPTXXXXRXXXPPPRRXTXXLSPVAXXXXXHLPXXXPHSXXSSWRXSAPPP 1164
P PPP PPP P PPP +S +P P S PPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 994 PPXPPPXPTXXXXRXXXPPP 1053
PP PPP P PPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPP 813
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +1
Query: 874 PSPXTYX-HQXXXAQXPXPTXXTLXXSAXXTXSXX*TYPXPPPXPPP 1011
P P + HQ Q P+ + + P PPP PPP
Sbjct: 727 PPPMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPP 773
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 994 PPXPPPXPTXXXXRXXXPPP 1053
PP PPP P PPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPP 813
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +1
Query: 874 PSPXTYX-HQXXXAQXPXPTXXTLXXSAXXTXSXX*TYPXPPPXPPP 1011
P P + HQ Q P+ + + P PPP PPP
Sbjct: 727 PPPMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPP 773
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 985 PXPPPXPPPXPTXXXXRXXXPPP 1053
P PPP PPP P PPP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 979 TYPXPPPXPPPXPTXXXXRXXXPPP 1053
T PPP PPP P PPP
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPP 175
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 985 PXPPPXPPPXPTXXXXRXXXPPP 1053
P PPP PPP P PPP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 979 TYPXPPPXPPPXPTXXXXRXXXPPP 1053
T PPP PPP P PPP
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPP 175
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 985 PXPPPXPPPXPTXXXXRXXXPPP 1053
P PPP PPP P PPP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPP 581
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 985 PXPPPXPPPXPTXXXXRXXXPPPRRXT 1065
P PPP PPP P PP R T
Sbjct: 512 PPPPPPPPPPPPALEQEISGPPTVRLT 538
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 982 YPXPPPXPPPXPTXXXXRXXXPPP 1053
YP PPP PP P PPP
Sbjct: 363 YPPPPPSRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 982 YPXPPPXPPPXPTXXXXRXXXPPP 1053
YP PPP PP P PPP
Sbjct: 373 YPPPPPSRPPAPPSGHGMIPPPPP 396
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 979 TYPXPPPXPPP 1011
T P PPP PPP
Sbjct: 22 TTPQPPPPPPP 32
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 991 PPPXPPPXPTXXXXRXXXP 1047
PPP PPP P + P
Sbjct: 27 PPPPPPPKPAPYVEQSAQP 45
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 991 PPPXPPPXPTXXXXRXXXPPPRRXTXXLSPV 1083
PPP PPP P PPP ++PV
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +1
Query: 985 PXPPPX---PPPXPTXXXXRXXXPPPRRXTXXLSPVAXXXXXHLP 1110
P PPP PPP P PPP +P+A +LP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 805
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 991 PPPXPPPXPTXXXXRXXXPPPRRXTXXLSPV 1083
PPP PPP P PPP ++PV
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +1
Query: 985 PXPPPX---PPPXPTXXXXRXXXPPPRRXTXXLSPVAXXXXXHLP 1110
P PPP PPP P PPP +P+A +LP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 805
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 991 PPPXPPPXPTXXXXRXXXPPPRRXTXXLSPV 1083
PPP PPP P PPP ++PV
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 382
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +1
Query: 985 PXPPPX---PPPXPTXXXXRXXXPPPRRXTXXLSPVAXXXXXHLP 1110
P PPP PPP P PPP +P+A +LP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 388
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Frame = +1
Query: 997 PXPPPXPTXXXXRXXXPPPRRXTXXLSPVAXXXXXHLPXXXPHS---XXSSWRXSAPPPX 1167
P PPP PPP L+PV + P S +R + PPP
Sbjct: 296 PIPPPPIKEESPPPPPPPPVASVSNLAPVPSVQLPYYNNIQPSSSTMHMPEFRPTEPPPS 355
Query: 1168 HXXRXPXRRAHXS 1206
+ P R S
Sbjct: 356 YSREDPYRSTSRS 368
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Frame = +1
Query: 997 PXPPPXPTXXXXRXXXPPPRRXTXXLSPVAXXXXXHLPXXXPHS---XXSSWRXSAPPPX 1167
P PPP PPP L+PV + P S +R + PPP
Sbjct: 296 PIPPPPIKEESPPPPPPPPVASVSNLAPVPSVQLPYYNNIQPSSSTMHMPEFRPTEPPPS 355
Query: 1168 HXXRXPXRRAHXS 1206
+ P R S
Sbjct: 356 YSREDPYRSTSRS 368
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 991 PPPXPPPXPTXXXXRXXXPPP 1053
PPP PPP P + PPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPP 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,705,160
Number of Sequences: 27780
Number of extensions: 166785
Number of successful extensions: 1355
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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