Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_O16
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0292 - 17358129-17358213,17358462-17358541,17358627-173587...    31   1.6  
11_06_0720 - 26617665-26617781,26617851-26617924,26618218-266183...    29   6.5  
07_01_0307 - 2194796-2199274                                           29   6.5  
08_01_0663 + 5721902-5723176,5724162-5724233,5724405-5724560,572...    28   8.6  
08_01_0662 + 5714108-5714147,5714336-5715669,5716482-5716673,571...    28   8.6  
04_01_0316 + 4251465-4251590,4251664-4251719,4252973-4253087,425...    28   8.6  

>02_03_0292 -
           17358129-17358213,17358462-17358541,17358627-17358797,
           17359440-17359541,17360216-17360365,17360549-17360671,
           17360781-17360867,17361209-17361289,17362071-17362210,
           17363490-17363534,17365315-17365485,17365784-17365805
          Length = 418

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = +3

Query: 387 SRGERYTQFKNHGPPXNANSFATGSELLRRLFNTYPDTKEYFKMV------RKLPEEEYS 548
           SRG     F +HG P + ++F     +++ L + + D   +  +V      R LP  E++
Sbjct: 90  SRGAHVDSFSSHGTPLHLSAFCQQDGVMKILLDHHADCYAWLNLVLTPPEHRVLPLIEHA 149

Query: 549 QNPQFKAHVINLMTSLNLAVN 611
           +   F   +  + T L +A+N
Sbjct: 150 ECGMFNKLLKPVFTPLIMALN 170


>11_06_0720 -
           26617665-26617781,26617851-26617924,26618218-26618331,
           26619375-26619399,26619564-26619620,26620273-26622888
          Length = 1000

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 402 YTQFKNHGPPXNANSFATGSELLRRLFNTYP 494
           Y Q +  G P NAN+FAT   L   L N  P
Sbjct: 133 YRQMRRDGVPCNANAFATVVSLCGSLENEVP 163


>07_01_0307 - 2194796-2199274
          Length = 1492

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 63  RIDRAARLHTQYQSNCIYFISKIRARKLVFNYK 161
           RID   ++HT+ ++     +SK R RKL  N+K
Sbjct: 803 RIDNLEKVHTKEEAAEAKLLSKTRLRKLELNWK 835


>08_01_0663 +
           5721902-5723176,5724162-5724233,5724405-5724560,
           5724655-5724844,5725173-5725255
          Length = 591

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 728 VHRCTTFGRRHTVSVGEXC 784
           + RC+TFG   T+S+GE C
Sbjct: 456 LRRCSTFGNLKTLSLGEWC 474


>08_01_0662 +
           5714108-5714147,5714336-5715669,5716482-5716673,
           5716769-5716958,5717398-5717477
          Length = 611

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 728 VHRCTTFGRRHTVSVGEXC 784
           + RC+TFG   T+S+GE C
Sbjct: 477 LRRCSTFGNLKTLSLGEWC 495


>04_01_0316 +
           4251465-4251590,4251664-4251719,4252973-4253087,
           4253174-4253417,4254189-4254325,4255006-4255065,
           4255336-4255460,4256021-4256048,4256267-4256336,
           4256513-4256565,4256966-4257025,4257498-4257544,
           4257617-4257741,4258572-4258686,4258778-4258826,
           4260415-4260471,4261126-4261209,4261363-4261442,
           4262005-4262094,4262252-4262375
          Length = 614

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +3

Query: 54  PASRIDRAARLHTQYQSNCIYFISKIRARKLVFNYKSHHRRDQFTFISKVLCIIR 218
           P S + R  R    Y +   +F+ ++R   ++FNYK+    +     +   C++R
Sbjct: 279 PPSLLLRIVRALQYYANTMKFFLYRLRVGNVLFNYKNTQMSEVTEDFTCPFCLVR 333


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,867,782
Number of Sequences: 37544
Number of extensions: 430378
Number of successful extensions: 1044
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)