Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_O13
(1089 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.006
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.007
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.010
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.040
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.070
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.37
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 1.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 2.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.6
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 27 3.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 6.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 6.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 6.1
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.7 bits (81), Expect = 0.006
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 357 PXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXLPXP 533
P P++ P P A +PP S PP+ PP GP + P P P +P P
Sbjct: 1691 PVRPQSAAP---PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 31.5 bits (68), Expect = 0.21
Identities = 18/66 (27%), Positives = 21/66 (31%)
Frame = +3
Query: 807 PXHTISPXPXXXSXPXPPXLXXPXXLXSXPXPTXXPPXPXIKTPFSXXTPXQTXPPXAPP 986
P H +S P PP + P + P P P P P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAP----TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Query: 987 SXPIXP 1004
S P P
Sbjct: 1739 SAPSVP 1744
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 381 PHSTPAXXAXSPPXTLXSSXXPPTPP-PXXXGPTTPPXPLXXXXVXPXLPXPPSXHXLXP 557
P STP S S+ PP PP P+ PP P P P PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG----PPSAPPPPLPASSAP 1741
Query: 558 S 560
S
Sbjct: 1742 S 1742
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1
Query: 823 PRXPXXXPPXXPPASXXPXXFXPIPXPP 906
P P PP P ++ P P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPP 1710
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 357 PXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPPXP 494
P P P PA PP + PP PPP G PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 30.3 bits (65), Expect = 0.49
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 444 PPTPPPXXXGPTTPPXPLXXXXVXPXLPXPP 536
PP PPP PT P P+ P + PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 29.9 bits (64), Expect = 0.65
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 393 PAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXLPXPP 536
P A P + P P P GP PP P P P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +2
Query: 848 PXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXSXRPPIPP 994
P P P PT +P P P+ P PP + PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.010
Identities = 24/98 (24%), Positives = 31/98 (31%)
Frame = +3
Query: 345 TTVSPXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXL 524
+ +P P P +PP SS PP P P P PP P +
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV 1205
Query: 525 PXPPSXHXLXPSNSXXXXXXXTNMPXXPTXXPRFQXPP 638
PP PS + +P P P + PP
Sbjct: 1206 GVPPVP---PPSTAPPVPTPSAGLP--PVPVPTAKAPP 1238
Score = 32.7 bits (71), Expect = 0.092
Identities = 46/229 (20%), Positives = 61/229 (26%), Gaps = 10/229 (4%)
Frame = +3
Query: 348 TVSPXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTP-----PPXXXGPTTPPXP---LXX 503
+ SP P P P + +PP L S+ PP P PP +TPP P
Sbjct: 1001 STSPAAPLARVP-PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGA 1059
Query: 504 XXVXPXLPXPPSXHXLXPSNS-XXXXXXXTNMPXXPTXXPRFQXPPXXXXXXXXXXXXXX 680
P +P P S P+ S + +P P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 681 XXXXXXXXXXXXXRLSPXFRHPXTLXXXXXXXXXXXXXXXXXPXHTISPXP-XXXSXPXP 857
P P P +++ P S P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Query: 858 PXLXXPXXLXSXPXPTXXPPXPXIKTPFSXXTPXQTXPPXAPPSXPIXP 1004
P + P P+ PP P P T PP PS + P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +3
Query: 357 PXXPRTGXPHSTPAXX-AXSPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXLPXP 533
P P + ++PA A PP SS PP P P P P+ P +P P
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAP-----PIPVPSTAPPVPIP 1046
Query: 534 PSXHXLXPSNS 566
S + S+S
Sbjct: 1047 TSTPPVPKSSS 1057
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 366 PRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXLPXPPSXH 545
P G P P A PP S+ PP P P P P V PS H
Sbjct: 1203 PSVGVPPVPPPSTA--PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPH 1260
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 7/73 (9%)
Frame = +2
Query: 794 PIXXPXSHNFPAPPXLFXPXXPXPREXPPTSXXS-------PSHRAPTXPLHQNPFLXXH 952
P+ P + P P P P P PP S P AP+ + P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 953 PPXNXXSXRPPIP 991
PP S PP+P
Sbjct: 1083 PPVPAPSGIPPVP 1095
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 181 AYXRSPREPCKRSKWYTNH*ALFKFIVVTSAGALXFYCLKQ 59
++ P EPC KW+ N A+ K +V + L Y +K+
Sbjct: 1361 SFSAKPVEPCASEKWWLNSTAVPKSVVQMNDSVL--YMIKE 1399
Score = 26.2 bits (55), Expect = 8.0
Identities = 21/102 (20%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Frame = +3
Query: 345 TTVSPXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPP----XPLXXXXV 512
+ +P P+ + +PP S PP P P P P P+
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Query: 513 XPXLPXPPSXHXLXPSNSXXXXXXXTNMPXXPTXXPRFQXPP 638
P +P P P+ S P P + PP
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.040
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Frame = +3
Query: 366 PRTGXPHSTPAXXAXSPPXTLXSSXX-PPTPPPXXXG---PTTPPXPLXXXXVXPXLPXP 533
P P S P+ PP + + PP PPP G P PP P +P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 534 PS 539
PS
Sbjct: 421 PS 422
Score = 30.7 bits (66), Expect = 0.37
Identities = 18/65 (27%), Positives = 21/65 (32%)
Frame = +3
Query: 345 TTVSPXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXL 524
T+ P P S P S P +L P PP P PP P P
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGA-PAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 525 PXPPS 539
P P+
Sbjct: 471 PAAPA 475
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +3
Query: 351 VSPXXPRTGXPHSTPAXXAXSPPXTLXSS----XXPPTPPPXXXGPTTPPXPLXXXXVXP 518
+ P P + P P+ A +PP S PP PP P + P P
Sbjct: 232 IPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVS-MNPAINSTSKP 290
Query: 519 XLPXPPS 539
LP P S
Sbjct: 291 PLPPPSS 297
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/88 (26%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Frame = +3
Query: 381 PHSTPAXXAXS-PPXTLXS-SXXPPTPPPXXXGPTTPPXPLXXXXVXPXLPXPPSXHXLX 554
P + P A + PP S + PP P P P+ PP P LP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS--LPPSAPPSLPMGAPAAPPL 449
Query: 555 PSNSXXXXXXXTNMPXXPTXXPRFQXPP 638
P ++ MP P P PP
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Frame = +3
Query: 372 TGXPHSTPAXXAXSPPX---TLXSSXXPPTPPP----XXXGPTTPPXPLXXXXVXPXLPX 530
T P P+ + PP +L + PP PPP P +PP P+ + P +
Sbjct: 227 TSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINS 286
Query: 531 PPSXHXLXPSNSXXXXXXXTNMPXXPTXXP 620
PS+ N P P
Sbjct: 287 TSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +3
Query: 843 SXPXPPXLXXPXXLXSXPXPTXXPPXPXIKTPFSXXTPXQTXPPXAPPS 989
S P PP + P + P PP P + + PP PPS
Sbjct: 249 SAPAPPPIPPPSN-GTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS 296
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.070
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 381 PHSTPAXXAXSPPXTLXSSXXPPTPP--PXXXGPTTPPXPLXXXXVXPXLPXPP 536
P S P + +PP + SS PP P P P+ P P + P +P PP
Sbjct: 154 PASAPPIPSKAPP--IPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.9 bits (64), Expect = 0.65
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Frame = +3
Query: 831 PXXXSXPXPPXLXXPXXLXSXPXPTXXPPXPXIKTPF--SXXTPXQ-TXPPXAPPSXPIX 1001
P S PP P P P PP P P S P Q P +PPS P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Query: 1002 P 1004
P
Sbjct: 191 P 191
Score = 29.9 bits (64), Expect = 0.65
Identities = 17/64 (26%), Positives = 22/64 (34%)
Frame = +3
Query: 354 SPXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXLPXP 533
+P P + P + PA SPP P PP P P+ P P
Sbjct: 164 APPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAP 223
Query: 534 PSXH 545
P+ H
Sbjct: 224 PAGH 227
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +3
Query: 822 SPXPXXXSXPXPPXLXXPXXLXSXPXPTXXPPXPXIKTPFSXXTP--XQTXPPXAPPSXP 995
S P P P + P P+ PP P P P + PP A P+ P
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Query: 996 I 998
+
Sbjct: 181 V 181
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +3
Query: 831 PXXXSXPXP-PXLXXPXXLXSXPXPTXXPPXPXIKTPFSXXTPXQTXPPXAPPSXPIXP 1004
P S P P P P + P P+ PP P + P PP P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 26.6 bits (56), Expect = 6.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +2
Query: 827 APPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXSXRPPIPP 994
APP P P PPTS P P P PP S PP P
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI-PSSLPPPAQP 177
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/67 (25%), Positives = 21/67 (31%)
Frame = +2
Query: 794 PIXXPXSHNFPAPPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXS 973
P+ + P PP P P PP P P P+H P PP
Sbjct: 211 PMHHKPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 974 XRPPIPP 994
+PP
Sbjct: 268 PGEHMPP 274
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/67 (25%), Positives = 21/67 (31%)
Frame = +2
Query: 794 PIXXPXSHNFPAPPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXS 973
P+ + P PP P P PP P P P+H P PP
Sbjct: 224 PMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 974 XRPPIPP 994
+PP
Sbjct: 281 PGEHMPP 287
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/67 (25%), Positives = 21/67 (31%)
Frame = +2
Query: 794 PIXXPXSHNFPAPPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXS 973
P+ + P PP P P PP P P P+H P PP
Sbjct: 237 PMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 974 XRPPIPP 994
+PP
Sbjct: 294 PGEHMPP 300
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/67 (25%), Positives = 21/67 (31%)
Frame = +2
Query: 794 PIXXPXSHNFPAPPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXS 973
P+ + P PP P P PP P P P+H P PP
Sbjct: 250 PMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 974 XRPPIPP 994
+PP
Sbjct: 307 PGEHMPP 313
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/67 (25%), Positives = 21/67 (31%)
Frame = +2
Query: 794 PIXXPXSHNFPAPPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXS 973
P+ + P PP P P PP P P P+H P PP
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 319
Query: 974 XRPPIPP 994
+PP
Sbjct: 320 PGEHMPP 326
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/67 (25%), Positives = 21/67 (31%)
Frame = +2
Query: 794 PIXXPXSHNFPAPPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXS 973
P+ + P PP P P PP P P P+H P PP
Sbjct: 276 PMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 332
Query: 974 XRPPIPP 994
+PP
Sbjct: 333 PGEHMPP 339
Score = 29.9 bits (64), Expect = 0.65
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +2
Query: 806 PXSHNFPAPPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXSXRPP 985
P H P PP P P PP P P P+H P PP
Sbjct: 203 PGEH-MPPPPMHHKPGEHMP---PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 258
Query: 986 IPP 994
+PP
Sbjct: 259 MPP 261
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/55 (27%), Positives = 18/55 (32%)
Frame = +2
Query: 794 PIXXPXSHNFPAPPXLFXPXXPXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPP 958
P+ + P PP P P PP P P P+H P PP
Sbjct: 289 PMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/64 (25%), Positives = 18/64 (28%), Gaps = 1/64 (1%)
Frame = +2
Query: 806 PXSHNFPAPPXLFXPXX-PXPREXPPTSXXSPSHRAPTXPLHQNPFLXXHPPXNXXSXRP 982
P H F F P PP P P P+H P PP
Sbjct: 185 PKHHEFDDEDREFPAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 244
Query: 983 PIPP 994
+PP
Sbjct: 245 HMPP 248
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 411 SPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXLPXPPSXH 545
SP + PPTP P PP P + P +P P H
Sbjct: 720 SPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTH 764
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/70 (25%), Positives = 24/70 (34%)
Frame = +3
Query: 348 TVSPXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPPXXXGPTTPPXPLXXXXVXPXLP 527
T S P TG +TP P T +S PP G ++ P P
Sbjct: 286 TTSTSIPPTGNS-TTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTS 344
Query: 528 XPPSXHXLXP 557
PP+ + P
Sbjct: 345 IPPTGNSTTP 354
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 348 TVSPXXPRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPP 461
TVS P S A +P +L S PP PPP
Sbjct: 157 TVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPP 194
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 366 PRTGXPHSTPAXXAXSPPXTLXSSXXPPTPPP 461
PR+G P +P+ S P TL + P P P
Sbjct: 352 PRSGRPRRSPSPSHLSIPSTLPPADGVPKPTP 383
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 6.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 444 PPTPPPXXXGPTTPPXP 494
PP PPP P+ PP P
Sbjct: 11 PPPPPPGFEPPSQPPPP 27
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 6.1
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = +3
Query: 831 PXXXSXPXPPXLXXPXXLXSXPXPTXXPPXPXI-KTPFSXXTPXQTXPPXAP--PSXPIX 1001
P S P PP + S P P P P P P P P P+ P+
Sbjct: 569 PEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVV 628
Query: 1002 P 1004
P
Sbjct: 629 P 629
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 6.1
Identities = 17/64 (26%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +3
Query: 348 TVSPXXPRTGXPHSTPAXXAXSPPXTLX-SSXXPPTPPPXXXGPTTPPXPLXXXXVXPXL 524
T +P P T P P P + PP PP P P P P +
Sbjct: 489 TSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAM 548
Query: 525 PXPP 536
P P
Sbjct: 549 PGIP 552
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,054,038
Number of Sequences: 5004
Number of extensions: 27965
Number of successful extensions: 223
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 573748416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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