Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_O12
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   3.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.8  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   5.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   8.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   8.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.8  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +3

Query: 471 LSCFPSRLLREAKTGYCGPLYTVIWAIKML 560
           + C+  +  R+++  + GP+ ++  +IKML
Sbjct: 85  MDCYFRQSWRDSRLSFLGPIKSLSLSIKML 114


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 279 LSTTLRSPLWNMEKVLWKRKLQVQLLCSLMVVK 377
           +S++L+    +   V W+RK+ +++L SL   K
Sbjct: 490 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATK 522


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 279 LSTTLRSPLWNMEKVLWKRKLQVQLLCSLMVVK 377
           +S++L+    +   V W+RK+ +++L SL   K
Sbjct: 528 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATK 560


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +3

Query: 516 YCGPLYTVIWAIKMLTPYHT--CKMKLNG 596
           YC  +Y  + A+KM    HT  CK  L G
Sbjct: 21  YCEKVYVSLGALKMHIRTHTLPCKCHLCG 49


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 446 HVGSVYGWSELFSFKTPPRGEDWLLRAAIYGD 541
           H+G++Y      SF+   R ED  L    Y D
Sbjct: 107 HLGTLYPGMRAPSFRCTERPEDGALILHYYSD 138


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 530 IYGDMGNKNAHSLSYLQDEAER 595
           +YGD+ N    ++SY+ D   R
Sbjct: 360 VYGDLHNFGHVAISYIHDPDHR 381


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 672 SSPTRASSVSMSYAKSPTWRITSKWSRSAS 583
           +S  +++  S+   KSP W+  +K +RS +
Sbjct: 733 NSAVKSTIQSLMKLKSPEWKDLAKKARSVN 762


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 710 PYMTCPGNHEEKYNFSNYVNRFSMPGPDSNLYYSFDL 820
           PY T    +++ Y  S Y N      PDS   Y  +L
Sbjct: 368 PYST--PEYDDTYMDSGYTNEIDFSFPDSVSDYPLEL 402


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 446 HVGSVYGWSELFSFKTPPRGEDWLLRAAIYGD 541
           H+G++Y      SF+   R ED  L    Y D
Sbjct: 107 HLGTLYPGMRAPSFRCTERPEDGALILHYYSD 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,397
Number of Sequences: 438
Number of extensions: 5070
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)