Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_O04
         (869 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047290-1|AAH47290.1|  180|Homo sapiens signal peptidase comple...   190   6e-48
AY359044-1|AAQ89403.1|  180|Homo sapiens signal peptidase protein.    190   6e-48
AK026302-1|BAB15437.1|  180|Homo sapiens protein ( Homo sapiens ...   190   6e-48

>BC047290-1|AAH47290.1|  180|Homo sapiens signal peptidase complex
           subunit 3 homolog (S. cerevisiae) protein.
          Length = 180

 Score =  190 bits (463), Expect = 6e-48
 Identities = 84/144 (58%), Positives = 109/144 (75%)
 Frame = +1

Query: 244 DYRTGAQMNTVKVVVKNVPDYGASRERNDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAEY 423
           D     +++  ++++KNV D+   RER+DLGF+TFD+  DL N+F+WNVKQLFLYL+AEY
Sbjct: 34  DRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEY 93

Query: 424 ITPSNELNQVVLWDKIILRGENAVLDFKNMNTKYYFWDDGNGLKGHSNVTLTLSWNIIPN 603
            T +N LNQVVLWDKI+LRG+N  L  K+M TKY+F+DDGNGLKG+ NVTLTLSWN++PN
Sbjct: 94  STKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPN 153

Query: 604 AGLLPNIQALGQHSFKFPIEYTQT 675
           AG+LP +   G  S  FP  Y  T
Sbjct: 154 AGILPLVTGSGHVSVPFPDTYEIT 177


>AY359044-1|AAQ89403.1|  180|Homo sapiens signal peptidase protein.
          Length = 180

 Score =  190 bits (463), Expect = 6e-48
 Identities = 84/144 (58%), Positives = 109/144 (75%)
 Frame = +1

Query: 244 DYRTGAQMNTVKVVVKNVPDYGASRERNDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAEY 423
           D     +++  ++++KNV D+   RER+DLGF+TFD+  DL N+F+WNVKQLFLYL+AEY
Sbjct: 34  DRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEY 93

Query: 424 ITPSNELNQVVLWDKIILRGENAVLDFKNMNTKYYFWDDGNGLKGHSNVTLTLSWNIIPN 603
            T +N LNQVVLWDKI+LRG+N  L  K+M TKY+F+DDGNGLKG+ NVTLTLSWN++PN
Sbjct: 94  STKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPN 153

Query: 604 AGLLPNIQALGQHSFKFPIEYTQT 675
           AG+LP +   G  S  FP  Y  T
Sbjct: 154 AGILPLVTGSGHVSVPFPDTYEIT 177


>AK026302-1|BAB15437.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22649 fis, clone HSI07332. ).
          Length = 180

 Score =  190 bits (463), Expect = 6e-48
 Identities = 84/144 (58%), Positives = 109/144 (75%)
 Frame = +1

Query: 244 DYRTGAQMNTVKVVVKNVPDYGASRERNDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAEY 423
           D     +++  ++++KNV D+   RER+DLGF+TFD+  DL N+F+WNVKQLFLYL+AEY
Sbjct: 34  DRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEY 93

Query: 424 ITPSNELNQVVLWDKIILRGENAVLDFKNMNTKYYFWDDGNGLKGHSNVTLTLSWNIIPN 603
            T +N LNQVVLWDKI+LRG+N  L  K+M TKY+F+DDGNGLKG+ NVTLTLSWN++PN
Sbjct: 94  STKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPN 153

Query: 604 AGLLPNIQALGQHSFKFPIEYTQT 675
           AG+LP +   G  S  FP  Y  T
Sbjct: 154 AGILPLVTGSGHVSVPFPDTYEIT 177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,429,964
Number of Sequences: 237096
Number of extensions: 1724460
Number of successful extensions: 2863
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2863
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)