Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_O01
         (1228 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   6.7  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   6.7  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   6.7  
Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical pr...    24   9.5  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -3

Query: 923 GXGXXPPPPXGFXXXXXXPXPGLXFXXGDXPPP 825
           G    PPPP G       P PG  F  G  PPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPG-GFKGGPPPPP 788


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -3

Query: 923 GXGXXPPPPXGFXXXXXXPXPGLXFXXGDXPPP 825
           G    PPPP G       P PG  F  G  PPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPG-GFKGGPPPPP 788


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -3

Query: 923 GXGXXPPPPXGFXXXXXXPXPGLXFXXGDXPPP 825
           G    PPPP G       P PG  F  G  PPP
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPG-GFKGGPPPPP 371


>Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical protein
            B0285.1 protein.
          Length = 730

 Score = 23.8 bits (49), Expect(2) = 9.5
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = -3

Query: 1205 PPFXPXKXFXPXFFXPPXXKFFPXXYXXTPP 1113
            PP      F P F  PP     P     TPP
Sbjct: 191  PPSFNINPFQPMFSQPPPPPLPPNSQFMTPP 221



 Score = 23.0 bits (47), Expect(2) = 9.5
 Identities = 13/42 (30%), Positives = 15/42 (35%)
 Frame = -3

Query: 1022 PPPXXPPXPFXXXESFWEXSXXSNKXFXLFXK*GXGXXPPPP 897
            PPP  PP PF       +    +   F L         PPPP
Sbjct: 220  PPPRPPPAPFSIPPPSVDIHFAATASFSL-----SSIPPPPP 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.313    0.135    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,583,547
Number of Sequences: 27780
Number of extensions: 154081
Number of successful extensions: 131
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)