Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N23
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0109 + 5671418-5671631,5675610-5675690,5676249-5676340,567...    67   2e-11
07_03_1120 + 24123822-24124318,24125877-24126006,24127334-241273...    61   1e-09
10_05_0115 - 9300918-9300972,9301299-9301396,9301476-9301556,930...    41   0.002
07_03_0037 + 12709014-12709104,12709407-12709612,12710033-127100...    29   6.5  
06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026           29   6.5  
07_03_1230 + 25044126-25044683                                         28   8.6  
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377...    28   8.6  
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179...    28   8.6  

>03_02_0109 +
           5671418-5671631,5675610-5675690,5676249-5676340,
           5676433-5676513,5676594-5676691,5676872-5676953,
           5677050-5677088
          Length = 228

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 25/60 (41%), Positives = 39/60 (65%)
 Frame = +3

Query: 375 GITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIRGIVDRIAG 554
           G  +VL+GWP  GM+ E YGF++LF GF P+ + FL+ +P++G +   P +   +DR  G
Sbjct: 164 GFFLVLIGWPFFGMLLEAYGFVVLFSGFWPTLVVFLQRIPIIGWIFQQPFVTSFLDRYRG 223



 Score = 37.9 bits (84), Expect = 0.011
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +2

Query: 170 DTQKLGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFFQRHKL 349
           D +K+G+GL                     A+GNILF+SGL   IG++ T  FF +    
Sbjct: 96  DLKKIGLGLTGFGVFFSFLGIIFFFDKGLIAMGNILFLSGLGLTIGLKSTMQFFTKPKNY 155

Query: 350 KASV 361
           K ++
Sbjct: 156 KGTI 159


>07_03_1120 +
           24123822-24124318,24125877-24126006,24127334-24127379,
           24128364-24128455,24128550-24128630,24128735-24128832,
           24128972-24129053,24129166-24129258
          Length = 372

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 24/54 (44%), Positives = 36/54 (66%)
 Frame = +3

Query: 375 GITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIRGI 536
           G  +VL+GWP  GM+AE YGF+ LFRGF P+A  +L+  P  G + + P++  +
Sbjct: 290 GFFLVLIGWPFFGMLAEAYGFVKLFRGFWPTAAVYLQKSPTFGWIFHHPLVTSV 343



 Score = 33.9 bits (74), Expect = 0.17
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +2

Query: 179 KLGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFFQRHKLKAS 358
           ++G+GL+                    AIGNILF+SG++  IG + T  FF +    K S
Sbjct: 225 EIGLGLSGFGVLFSFLGIIMLFDKGFLAIGNILFVSGVSLTIGPKSTVQFFTKPKNHKGS 284

Query: 359 V 361
           +
Sbjct: 285 I 285


>10_05_0115 -
           9300918-9300972,9301299-9301396,9301476-9301556,
           9301635-9301726,9301832-9301859
          Length = 117

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +3

Query: 375 GITIVLLGWPMIGMIAEMYGFLLLF 449
           G+ +VL+GWP  GM+ E YGF++LF
Sbjct: 75  GLLLVLIGWPFFGMLLEAYGFIVLF 99



 Score = 36.7 bits (81), Expect = 0.025
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 176 QKLGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFFQRHKLKA 355
           Q++G+GL                     A+GNILF+SGL   IG++ T  FF +    K 
Sbjct: 9   QEIGIGLTGFGVFFSFLGIIFFFDKGLLAMGNILFLSGLGLTIGLKSTLQFFTKPKNYKG 68

Query: 356 SV 361
           ++
Sbjct: 69  TI 70


>07_03_0037 +
           12709014-12709104,12709407-12709612,12710033-12710097,
           12710143-12710404,12711332-12711448,12711779-12712056,
           12712304-12712406
          Length = 373

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 590 SALESYHVPTIVSRYPIDDPSYYRKIQ*RPQN 495
           S L+ Y +P    R+P+ DP+   ++Q RP++
Sbjct: 316 SLLDYYPLPKRGERFPVSDPNMMPRLQPRPES 347


>06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026
          Length = 267

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -1

Query: 300 THVRPLMNR--ILPMARRPLSNNRSTPRNRNVIPKPARPTP 184
           TH++  + +  I P+  +PL   R  PR ++  P P  P P
Sbjct: 110 THIKKKLRKMGIDPVTHQPLEPPRPPPREQDATPPPPPPPP 150


>07_03_1230 + 25044126-25044683
          Length = 185

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -2

Query: 419 YHPDHGPAEQHYGDAX*RRLRTPSACAVGRRRKTSSGCR 303
           YHP+H   E HYG+        P  CA   R  T  G R
Sbjct: 8   YHPEHLVTEHHYGEGSGSGSGNP--CAACERVVTGDGYR 44


>05_07_0283 -
           28937027-28937110,28937211-28937549,28937641-28937754,
           28937843-28937955,28939050-28939087,28939315-28939478,
           28939746-28939794,28940986-28941152
          Length = 355

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 408 IGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIRGIVDRIAGNN 560
           +G +    GF  L+RG+LPS I    +VP +G  LN  +   + D +   N
Sbjct: 192 LGSVYREEGFRALYRGWLPSVIG---VVPYVG--LNFAVYESLKDWLLQTN 237


>02_05_1263 +
           35316083-35316185,35317167-35317220,35317665-35317903,
           35317989-35318089,35318390-35318583,35318885-35319003,
           35319624-35319749,35320081-35320142,35320265-35320348,
           35320580-35320664
          Length = 388

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
 Frame = -3

Query: 556 FPAILSTIPLIIGRFSSDPKT-GTILKKLMAEGRNPLNNSRKPYISAIIP------IMGQ 398
           FP     I ++ G F    K    IL+KL+AEG        +P +  ++P      I+G+
Sbjct: 101 FPGTNDRIIMVSGLFDEVIKAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGK 160

Query: 397 PSSTMVMPXKEGYGRLQLVP 338
             ST+    ++ +  +++ P
Sbjct: 161 GGSTIKSFIEDSHAGIKISP 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,160,181
Number of Sequences: 37544
Number of extensions: 289648
Number of successful extensions: 759
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)