Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N23
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2347|AAX52500.1|  140|Drosophila melanogaster CG32576-P...    87   2e-17
AY071265-1|AAL48887.1|  128|Drosophila melanogaster RE29988p pro...    78   2e-14
AE014298-2349|AAN09388.1|  128|Drosophila melanogaster CG32576-P...    78   2e-14

>AE014298-2347|AAX52500.1|  140|Drosophila melanogaster CG32576-PB,
           isoform B protein.
          Length = 140

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 42/69 (60%), Positives = 48/69 (69%)
 Frame = +3

Query: 369 LXGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIRGIVDRI 548
           L GI IVLLG+P+ GMI E YGF  LF GF P AINFL  VPVLGSL NLP I+ IV ++
Sbjct: 72  LGGIVIVLLGFPIFGMIIESYGFFALFSGFFPVAINFLGRVPVLGSLFNLPFIQKIVQKL 131

Query: 549 AGNNGRNMV 575
            G+  R  V
Sbjct: 132 GGDGNRTTV 140



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 32/64 (50%), Positives = 39/64 (60%)
 Frame = +2

Query: 167 TDTQKLGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFFQRHK 346
           +D QK+G+GLA                    AIGNILFISGL CVIG++RT  FFFQRHK
Sbjct: 5   SDLQKIGIGLAGFGIFFLFLGMLLLFDKGLLAIGNILFISGLACVIGVERTMRFFFQRHK 64

Query: 347 LKAS 358
           +K +
Sbjct: 65  VKGT 68


>AY071265-1|AAL48887.1|  128|Drosophila melanogaster RE29988p
           protein.
          Length = 128

 Score = 77.8 bits (183), Expect = 2e-14
 Identities = 37/56 (66%), Positives = 41/56 (73%)
 Frame = +3

Query: 369 LXGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIRGI 536
           L GI IVLLG+P+ GMI E YGF  LF GF P AINFL  VPVLGSL NLP I+ +
Sbjct: 72  LGGIVIVLLGFPIFGMIIESYGFFALFSGFFPVAINFLGRVPVLGSLFNLPFIQKV 127



 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 31/64 (48%), Positives = 38/64 (59%)
 Frame = +2

Query: 167 TDTQKLGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFFQRHK 346
           +D QK+G+GLA                    AIGNILFISGL CVIG++R   FFFQRHK
Sbjct: 5   SDLQKIGIGLAGFGIFFLFLGMLLLFDKGLLAIGNILFISGLACVIGVERAMRFFFQRHK 64

Query: 347 LKAS 358
           +K +
Sbjct: 65  VKGT 68


>AE014298-2349|AAN09388.1|  128|Drosophila melanogaster CG32576-PA,
           isoform A protein.
          Length = 128

 Score = 77.8 bits (183), Expect = 2e-14
 Identities = 37/56 (66%), Positives = 41/56 (73%)
 Frame = +3

Query: 369 LXGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIRGI 536
           L GI IVLLG+P+ GMI E YGF  LF GF P AINFL  VPVLGSL NLP I+ +
Sbjct: 72  LGGIVIVLLGFPIFGMIIESYGFFALFSGFFPVAINFLGRVPVLGSLFNLPFIQKV 127



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 32/64 (50%), Positives = 39/64 (60%)
 Frame = +2

Query: 167 TDTQKLGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFFQRHK 346
           +D QK+G+GLA                    AIGNILFISGL CVIG++RT  FFFQRHK
Sbjct: 5   SDLQKIGIGLAGFGIFFLFLGMLLLFDKGLLAIGNILFISGLACVIGVERTMRFFFQRHK 64

Query: 347 LKAS 358
           +K +
Sbjct: 65  VKGT 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,470,085
Number of Sequences: 53049
Number of extensions: 489062
Number of successful extensions: 1486
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)