Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N23
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23521-7|AAC46811.2|  141|Caenorhabditis elegans Hypothetical pr...    72   6e-13
U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical pr...    33   0.36 
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr...    33   0.36 
Z81489-2|CAB04011.2|  360|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U22832-2|AAA64509.2|  571|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protei...    29   4.4  
AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal chem...    29   4.4  
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    28   7.8  

>U23521-7|AAC46811.2|  141|Caenorhabditis elegans Hypothetical
           protein F41C3.4 protein.
          Length = 141

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 30/59 (50%), Positives = 44/59 (74%)
 Frame = +3

Query: 375 GITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIRGIVDRIA 551
           GI +VL G+P+ GMIAE +GF++LF GFLP  +N LR +P + ++  LP IR ++DR+A
Sbjct: 76  GILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTITYLPGIRQVLDRLA 134



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 26/63 (41%), Positives = 35/63 (55%)
 Frame = +2

Query: 173 TQKLGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFFQRHKLK 352
           T+++GVGL                     AIGN+LFI G+T +IG+QRT  FFF+  KLK
Sbjct: 9   TKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVFFFEFRKLK 68

Query: 353 ASV 361
            S+
Sbjct: 69  GSI 71


>U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical
           protein F32A5.2b protein.
          Length = 859

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 276 RILPMARRPLSNNRSTPRNR-NVIPKPARPTP 184
           R+  + RRP +N R  PR R N+I    RPTP
Sbjct: 139 RLQTVTRRPFANRRPAPRQRTNIIRPTIRPTP 170


>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
           protein F32A5.2a protein.
          Length = 1000

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 276 RILPMARRPLSNNRSTPRNR-NVIPKPARPTP 184
           R+  + RRP +N R  PR R N+I    RPTP
Sbjct: 280 RLQTVTRRPFANRRPAPRQRTNIIRPTIRPTP 311


>Z81489-2|CAB04011.2|  360|Caenorhabditis elegans Hypothetical
           protein C55A1.3 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 378 ITIVLLGWPM-IGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIR 530
           I ++L+  P  +G +  M+G  +LF G LP+   FL   P+L  L N  IIR
Sbjct: 270 IPVILMHIPASLGFLFSMFGQSILFFGELPTFSVFL--YPILDPLPNFFIIR 319


>U22832-2|AAA64509.2|  571|Caenorhabditis elegans Hypothetical
           protein C09F5.1 protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 262 HWQYPVHKWSDMRDRHPEDVFLLLPTAQAEG 354
           HW+YP+   S  RD++ E V   +PT  A+G
Sbjct: 528 HWKYPLSSESTKRDKNGEWVH-WIPTTNAQG 557


>AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protein
           protein.
          Length = 917

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 610 FLCINKTKTLNSV*YIDDCVRVSVTFM 690
           FLC N T  L S  Y+D C+R S +F+
Sbjct: 647 FLCCNMTNPLFSDSYLDFCLRNSTSFL 673


>AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal
           chemotaxis protein 14 protein.
          Length = 917

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 610 FLCINKTKTLNSV*YIDDCVRVSVTFM 690
           FLC N T  L S  Y+D C+R S +F+
Sbjct: 647 FLCCNMTNPLFSDSYLDFCLRNSTSFL 673


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
            F57F4.4 protein.
          Length = 2090

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 433  ASCCCSEDSCLLPLIS 480
            + CCCS D+CL P +S
Sbjct: 1660 SGCCCSTDACLDPTVS 1675


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 433  ASCCCSEDSCLLPLIS 480
            + CCCS D+CL P +S
Sbjct: 1660 SGCCCSTDACLDPTVS 1675


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,239,598
Number of Sequences: 27780
Number of extensions: 251723
Number of successful extensions: 698
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)