Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N21
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1075 - 8770120-8770371,8770684-8770770,8770866-8770946,877...    86   4e-17
03_02_0643 - 10090720-10091007,10091121-10091228,10091314-100914...    81   2e-15
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041...    41   0.001
05_04_0403 + 20997191-20998816                                         34   0.17 
01_06_1510 - 37859664-37861319                                         33   0.23 
03_05_1095 - 30360067-30360254,30360364-30360484,30360564-303608...    33   0.40 
11_01_0290 - 2187273-2187311,2187473-2187582,2187747-2187867,218...    29   5.0  
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820...    29   5.0  

>06_01_1075 -
           8770120-8770371,8770684-8770770,8770866-8770946,
           8771043-8771177,8771363-8771584,8771676-8771756,
           8771954-8772115,8772991-8773106,8774333-8774474,
           8774592-8774687,8774987-8775125,8776297-8776376
          Length = 530

 Score = 85.8 bits (203), Expect = 4e-17
 Identities = 60/154 (38%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
 Frame = +3

Query: 174 MCGIWATFGVTG---GLTPTCVKCFSNIRHRGPDAWRIEQDAREPLAILGFQRLAIVDGR 344
           MCGI A  GV           ++    +RHRGPD W      ++    L  QRLAIVD  
Sbjct: 1   MCGILAVLGVADVSLAKRSRIIELSRRLRHRGPD-WSGIHCYQD--CYLAHQRLAIVDPT 57

Query: 345 HGMQPMRLHCYPRTTLIC-NGEIYNCKRLQ---KQHEFQYETNCDVEAIIHLYQRFGIEE 512
            G QP  L+   ++ ++  NGEIYN + L+   K H+FQ  ++C+V  I HLY+ +G EE
Sbjct: 58  SGDQP--LYNEDKSVVVTVNGEIYNHEELKANLKSHKFQTASDCEV--IAHLYEEYG-EE 112

Query: 513 AVTNLDGVFSFCLVDGEKNKVYIARDPYGVRPLF 614
            V  LDG+F+F L+D        ARD  G+ PL+
Sbjct: 113 FVDMLDGMFAFVLLDTRDKSFIAARDAIGICPLY 146


>03_02_0643 -
           10090720-10091007,10091121-10091228,10091314-10091400,
           10091488-10091568,10091669-10091803,10091919-10092140,
           10092377-10092457,10092565-10092726,10092851-10093041,
           10093190-10093331,10093449-10093547,10093668-10093806,
           10094355-10094392
          Length = 590

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 60/145 (41%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
 Frame = +3

Query: 246 IRHRGPDAWRIEQDAREPLAILGFQRLAIVDGRHGMQPMRLHCYPRT-TLICNGEIYNCK 422
           ++HRGPD   + Q     LA    QRLAIV    G QP  L+   RT  ++ NGEIYN K
Sbjct: 14  LKHRGPDWSGLYQCEGNFLAQ---QRLAIVSPLSGDQP--LYNADRTIVVVANGEIYNHK 68

Query: 423 RLQKQH--EFQYETNCDVEAIIHLYQRFGIEEAVTNLDGVFSFCLVDGEKNKVYIARDPY 596
           +++KQ   +  + T  D E II LY+ +G E+ V  LDGVF+F L D        ARD  
Sbjct: 69  KIRKQFASKHTFSTGSDCEVIIPLYEEYG-EDFVDMLDGVFAFVLYDTRTKTYMAARDAI 127

Query: 597 GVRPLFSFHDPENDVLAICSEAKGL 671
           GV PL+     +  V  I SE K L
Sbjct: 128 GVNPLYIGRGSDGAVW-ISSEMKAL 151


>03_06_0296 +
           32901696-32901892,32901989-32902232,32903992-32904112,
           32904219-32904406
          Length = 249

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
 Frame = +3

Query: 345 HGMQPMRLHCYPRTT-LIC--NGEIYNCKRLQKQHEFQYETNCDVEAIIHLYQR------ 497
           HG  P+    +  T  + C   G I N   L++Q+    + + ++  II  Y+       
Sbjct: 58  HGQSPLLPRLFAATDEIFCLFQGTIENIAVLKQQYGLHNKGSTEINIIIEAYRTLRDRGP 117

Query: 498 FGIEEAVTNLDGVFSFCLVDGEKNKVYIARDPYGVRPLFSFHDPEN 635
           +  ++ V +++G F+F L D   N V++A D  G  P +   DP++
Sbjct: 118 YPADQVVRDINGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDPDS 163


>05_04_0403 + 20997191-20998816
          Length = 541

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
 Frame = +3

Query: 399 NGEIYNCKRLQKQHEFQ---YETNCDVEAIIHLYQRF-------GIEEAVTNLDGVFSFC 548
           NG + N + L+ + E +   + T+ D E I+HL            I +A   L G +S  
Sbjct: 183 NGNLVNYQALRNKLEARGSIFNTSSDTEVILHLIATSLSRPLLSRICDACERLAGAYSLL 242

Query: 549 LVDGEKNKVYIARDPYGVRPLFSFHDPENDVLAICSEAKGL 671
            +  +K  ++  RDP+G RPL       N  +A  SE   L
Sbjct: 243 FLTADK--MFAVRDPHGFRPLV-LGRRRNGTVAFASETCAL 280


>01_06_1510 - 37859664-37861319
          Length = 551

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
 Frame = +3

Query: 399 NGEIYNCKRLQKQHEFQ---YETNCDVEAIIHLYQRF-------GIEEAVTNLDGVFSFC 548
           NG + N + L+ + E Q   + T+ D E I+HL            I +A   L G +S  
Sbjct: 189 NGNLVNYQALRNKLEAQGSIFSTSSDTEVILHLIATSLSRPLLARICDACERLAGAYSLL 248

Query: 549 LVDGEKNKVYIARDPYGVRPL 611
            +  +K  +   RDP+G RPL
Sbjct: 249 FLTADK--LLAVRDPFGFRPL 267


>03_05_1095 -
           30360067-30360254,30360364-30360484,30360564-30360804,
           30362361-30362566
          Length = 251

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
 Frame = +3

Query: 402 GEIYNCKRLQKQHEFQYETNCDVEAIIHLYQRFG------IEEAVTNLDGVFSFCLVDGE 563
           G I N   L KQH    +T  +V  +I  Y+           + V +L G F+F L D  
Sbjct: 83  GHIENIASL-KQHYGLSKTATEVTILIEAYRTLRDRGPLPASQVVRDLSGKFTFILYDTL 141

Query: 564 KNKVYIARDPYGVRPLFSFHDPENDVL 644
               ++A D  G  P F   D EN ++
Sbjct: 142 SKSTFVAADADGSIPFFWGVDSENHLV 168


>11_01_0290 -
           2187273-2187311,2187473-2187582,2187747-2187867,
           2188001-2188241,2190128-2190330
          Length = 237

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
 Frame = +3

Query: 402 GEIYNCKRLQKQHEFQYETNCDVEAIIHLYQR------FGIEEAVTNLDGVFSFCLVDGE 563
           G + N  RL +Q+      N +V  +I  Y+       +     ++ L G ++F L D  
Sbjct: 82  GVLDNLGRLSQQYGLSKGAN-EVLLVIEAYKTLRDRAPYPASFMLSQLTGSYAFVLFDKS 140

Query: 564 KNKVYIARDPYGVRPLF 614
            + + +A DP G  PLF
Sbjct: 141 TSSLLVASDPEGKVPLF 157


>02_05_0300 +
           27681204-27681656,27681745-27681840,27681933-27682022,
           27682126-27682227,27682310-27682456,27683608-27683748,
           27683749-27683808,27685133-27685230,27685308-27685410,
           27685954-27686037
          Length = 457

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +1

Query: 730 NLQVWSILESGKVKLDYTHQ 789
           +LQVW+  ESG +++ YTH+
Sbjct: 341 SLQVWAATESGSLEVTYTHK 360


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,807,299
Number of Sequences: 37544
Number of extensions: 441194
Number of successful extensions: 954
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)