Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N21
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022973-3|AAC25799.1|  551|Caenorhabditis elegans Asparaginyl t...    89   5e-18
U41034-7|AAN72427.1|  465|Caenorhabditis elegans Hypothetical pr...    68   1e-11
U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical pr...    68   1e-11
U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical pr...    68   1e-11
U23513-4|AAP68947.1|  322|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guany...    29   4.5  

>AF022973-3|AAC25799.1|  551|Caenorhabditis elegans Asparaginyl trna
           synthetase protein2 protein.
          Length = 551

 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 69/169 (40%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
 Frame = +3

Query: 174 MCGIWATFGVTGGLTPTCVKCFSNIRHRGPDAWRIEQDAREPLAILGFQRLAIV--DGRH 347
           MCGIWA  G    +TP     F  I  RGPD   +E+   +P   LGF RLAIV      
Sbjct: 1   MCGIWAIIGEQ--VTPQQQDAFMKIVGRGPDLTVLEEV--QPNVHLGFHRLAIVMPGDTP 56

Query: 348 GMQPMRLHCYPRTTLICNGEIYNCKRLQKQHEFQYETN-CDVEAIIHLYQRFG--IEEAV 518
             QP+        +++CNGEIYN + L+    F  +    D  AII  + +    ++EA 
Sbjct: 57  SAQPI---VGGGLSVVCNGEIYNHQSLKIDCPFTLKNGGSDCAAIITSFIKHNKDLKEAC 113

Query: 519 TNLDGVFSFCLVDGEKNKVYIARDPYGVRPLFSFHDPENDVLAICSEAK 665
            +LDGVF+F + D +KN VYI RDP GVRPLF  ++  N  L I SE K
Sbjct: 114 ASLDGVFAFIMAD-DKN-VYIGRDPIGVRPLFYGYN-SNGSLLIGSEVK 159


>U41034-7|AAN72427.1|  465|Caenorhabditis elegans Hypothetical
           protein M02D8.4b protein.
          Length = 465

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
 Frame = +3

Query: 252 HRGPDAWRIEQDAREPLAILGFQRLAIVDGRHGMQPMRLHCYPRTTLICNGEIYNCKRLQ 431
           HRGPD     QD +    IL  +RLAI+D    +QP++    P   +I NGEIYN + L+
Sbjct: 32  HRGPDFSGCYQDTKTG-DILVHERLAIMD-LGVVQPLQ-GTAPNRQVIHNGEIYNHQELR 88

Query: 432 KQH--EFQYETNCDVEAIIHLYQRFGIEEAVTNLDGVFSFCL-VDGEKNKVYIARDPYGV 602
                ++  +T+CD E II LY+++        LDGVF+F L  DG+      ARDP GV
Sbjct: 89  DTELKKYNLKTHCDSEVIIFLYEKYRDGHICNLLDGVFAFVLCCDGD---FLAARDPLGV 145

Query: 603 RPLF 614
           + ++
Sbjct: 146 KQMY 149


>U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical
           protein M02D8.4c protein.
          Length = 538

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
 Frame = +3

Query: 252 HRGPDAWRIEQDAREPLAILGFQRLAIVDGRHGMQPMRLHCYPRTTLICNGEIYNCKRLQ 431
           HRGPD     QD +    IL  +RLAI+D    +QP++    P   +I NGEIYN + L+
Sbjct: 32  HRGPDFSGCYQDTKTG-DILVHERLAIMD-LGVVQPLQ-GTAPNRQVIHNGEIYNHQELR 88

Query: 432 KQH--EFQYETNCDVEAIIHLYQRFGIEEAVTNLDGVFSFCL-VDGEKNKVYIARDPYGV 602
                ++  +T+CD E II LY+++        LDGVF+F L  DG+      ARDP GV
Sbjct: 89  DTELKKYNLKTHCDSEVIIFLYEKYRDGHICNLLDGVFAFVLCCDGD---FLAARDPLGV 145

Query: 603 RPLF 614
           + ++
Sbjct: 146 KQMY 149


>U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical
           protein M02D8.4a protein.
          Length = 567

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
 Frame = +3

Query: 252 HRGPDAWRIEQDAREPLAILGFQRLAIVDGRHGMQPMRLHCYPRTTLICNGEIYNCKRLQ 431
           HRGPD     QD +    IL  +RLAI+D    +QP++    P   +I NGEIYN + L+
Sbjct: 32  HRGPDFSGCYQDTKTG-DILVHERLAIMD-LGVVQPLQ-GTAPNRQVIHNGEIYNHQELR 88

Query: 432 KQH--EFQYETNCDVEAIIHLYQRFGIEEAVTNLDGVFSFCL-VDGEKNKVYIARDPYGV 602
                ++  +T+CD E II LY+++        LDGVF+F L  DG+      ARDP GV
Sbjct: 89  DTELKKYNLKTHCDSEVIIFLYEKYRDGHICNLLDGVFAFVLCCDGD---FLAARDPLGV 145

Query: 603 RPLF 614
           + ++
Sbjct: 146 KQMY 149


>U23513-4|AAP68947.1|  322|Caenorhabditis elegans Hypothetical
           protein D2021.2a protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 867 FSLTFISIXYFPVRKAQIWCLPRCEILMCVIKFDF--TTFKYTPH 739
           F +T++   Y P+  A    L  C  LM +I+FD+   T+K  P+
Sbjct: 37  FFMTYLLFKYLPLIIATFSTLISCIFLMVLIRFDYHDPTYKLLPY 81


>Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -3

Query: 476 GFDITVCFILKLMLFL*AFTVVNLTITD*RSARVTV*AHRLHTVPTVHDS 327
           GF I VC   K+ LF+ AF VVNL  T        V  H ++ V T+ +S
Sbjct: 439 GF-IRVCDFSKISLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIGES 487


>Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -3

Query: 476 GFDITVCFILKLMLFL*AFTVVNLTITD*RSARVTV*AHRLHTVPTVHDS 327
           GF I VC   K+ LF+ AF VVNL  T        V  H ++ V T+ +S
Sbjct: 439 GF-IRVCDFSKISLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIGES 487


>AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-33 protein.
          Length = 945

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -3

Query: 476 GFDITVCFILKLMLFL*AFTVVNLTITD*RSARVTV*AHRLHTVPTVHDS 327
           GF I VC   K+ LF+ AF VVNL  T        V  H ++ V T+ +S
Sbjct: 439 GF-IRVCDFSKISLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIGES 487


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,227,977
Number of Sequences: 27780
Number of extensions: 405706
Number of successful extensions: 950
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)