Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N19
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.6  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   8.4  
01_06_1536 + 38075023-38075359,38075834-38075963,38076204-380764...    28   8.4  

>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 271  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 369
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 635 DEKICYNYGIIKENEQFVM 691
           DE +C+ YG ++ENE +++
Sbjct: 459 DEVLCWLYGTVRENEDYIL 477


>01_06_1536 +
           38075023-38075359,38075834-38075963,38076204-38076419,
           38076520-38077137,38077226-38078075
          Length = 716

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 746 AILSSLLGVSPGNWNSWRTLR 684
           A+L  L  V PG W SWR LR
Sbjct: 369 AMLKVLRVVQPGQWVSWRALR 389


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,430,930
Number of Sequences: 37544
Number of extensions: 400863
Number of successful extensions: 897
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)