Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_N14
(882 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein. 144 3e-34
AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-C... 144 4e-34
BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase, G... 125 2e-28
BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase, G... 125 2e-28
BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein. 122 2e-27
BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein pr... 93 1e-18
BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase, A... 93 1e-18
AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase, A... 93 1e-18
AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase, A... 93 1e-18
AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens ... 93 1e-18
AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl C... 93 1e-18
AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens ... 93 2e-18
AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-C... 93 2e-18
AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA synth... 83 1e-15
AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase, A... 82 2e-15
BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for IM... 72 2e-12
AB065558-1|BAC05796.1| 312|Homo sapiens seven transmembrane hel... 31 4.2
>BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein.
Length = 432
Score = 144 bits (350), Expect = 3e-34
Identities = 82/187 (43%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Frame = +2
Query: 296 LASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVV 472
LA+ + ++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+
Sbjct: 23 LAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVL 82
Query: 473 KAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMV 652
KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMV
Sbjct: 83 KAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMV 142
Query: 653 AESVNIKRETYFSYCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDX 832
AE+++I RETY + NP L+ +DIFEGI D
Sbjct: 143 AEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDS 202
Query: 833 VANEIXE 853
A + E
Sbjct: 203 QAQRMAE 209
>AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 404
Score = 144 bits (349), Expect = 4e-34
Identities = 81/179 (45%), Positives = 103/179 (57%), Gaps = 1/179 (0%)
Frame = +2
Query: 320 RVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGG 496
++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+KAQILAGG
Sbjct: 3 QLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGG 62
Query: 497 RGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKR 676
RGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMVAE+++I R
Sbjct: 63 RGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISR 122
Query: 677 ETYFSYCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
ETY + R NP L+ +DIFEGI D A + E
Sbjct: 123 ETYLAILMDRSCNGPVLVGSPQGRSDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 181
>BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 125 bits (302), Expect = 2e-28
Identities = 70/156 (44%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Frame = +2
Query: 389 VSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKI 565
V +Q F + D+ + A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + +
Sbjct: 6 VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVV 65
Query: 566 VDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSYCNGEKXXXXXXXXXXXX 745
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +
Sbjct: 66 GQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQG 125
Query: 746 RYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
NP L+ +DIFEGI D A + E
Sbjct: 126 GVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 161
>BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 125 bits (302), Expect = 2e-28
Identities = 70/156 (44%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Frame = +2
Query: 389 VSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKI 565
V +Q F + D+ + A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + +
Sbjct: 6 VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVV 65
Query: 566 VDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSYCNGEKXXXXXXXXXXXX 745
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +
Sbjct: 66 GQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQG 125
Query: 746 RYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
NP L+ +DIFEGI D A + E
Sbjct: 126 GVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 161
>BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein.
Length = 362
Score = 122 bits (294), Expect = 2e-27
Identities = 66/139 (47%), Positives = 80/139 (57%)
Frame = +2
Query: 437 ALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQT 616
A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQT
Sbjct: 1 AAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQT 60
Query: 617 PKEGILVNKVMVAESVNIKRETYFSYCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKT 796
PKEG+ VNKVMVAE+++I RETY + NP L+
Sbjct: 61 PKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFK 120
Query: 797 VPVDIFEGISDXVANEIXE 853
+DIFEGI D A + E
Sbjct: 121 EQIDIFEGIKDSQAQRMAE 139
>BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein
protein.
Length = 472
Score = 93.1 bits (221), Expect = 1e-18
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 511
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 60 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 119
Query: 512 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 691
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 120 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 179
Query: 692 YCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
++P + P+DI EGI A ++ +
Sbjct: 180 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 233
>BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 93.1 bits (221), Expect = 1e-18
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 511
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 512 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 691
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 692 YCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
++P + P+DI EGI A ++ +
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
>AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 441
Score = 93.1 bits (221), Expect = 1e-18
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 511
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 29 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 88
Query: 512 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 691
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 89 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 148
Query: 692 YCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
++P + P+DI EGI A ++ +
Sbjct: 149 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 202
>AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 93.1 bits (221), Expect = 1e-18
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 511
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 512 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 691
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 692 YCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
++P + P+DI EGI A ++ +
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
>AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ10985 fis, clone PLACE1001817, highly similar to
Homo sapiens ATP-specific succinyl-CoA synthetase beta
subunit ).
Length = 463
Score = 93.1 bits (221), Expect = 1e-18
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 511
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 512 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 691
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 692 YCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
+ P V P+DI EGI A ++ +
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAVIKEPIDIEEGIKKEQALQLAQ 224
>AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl CoA
synthetase beta subunit precursor protein.
Length = 463
Score = 93.1 bits (221), Expect = 1e-18
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 511
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 512 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 691
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 692 YCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
++P + P+DI EGI A ++ +
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
>AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10596 fis, clone NT2RP2004799, moderately
similar to PROBABLE SUCCINYL-COA LIGASE [GDP-FORMING],
BETA-CHAIN ).
Length = 441
Score = 92.7 bits (220), Expect = 2e-18
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 511
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 29 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 88
Query: 512 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 691
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 89 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 148
Query: 692 YCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
+ P + P+DI EGI A ++ +
Sbjct: 149 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQ 202
>AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 426
Score = 92.7 bits (220), Expect = 2e-18
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 511
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 14 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 73
Query: 512 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 691
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 74 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 133
Query: 692 YCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
+ P + P+DI EGI A ++ +
Sbjct: 134 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQ 187
>AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA
synthetase protein.
Length = 403
Score = 83.4 bits (197), Expect = 1e-15
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +2
Query: 368 DLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGHFDNGFKGGVHL 544
+LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG F++G KGGV +
Sbjct: 2 ELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKI 61
Query: 545 TKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSYCNGEKXXXXX 724
+ ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 62 VFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPV 121
Query: 725 XXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
+ P + P+DI EGI A ++ +
Sbjct: 122 LIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQ 164
>AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 298
Score = 82.2 bits (194), Expect = 2e-15
Identities = 44/131 (33%), Positives = 69/131 (52%)
Frame = +2
Query: 461 EYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVN 640
+ V+KAQ+LAGGRGKG F++G KGGV + + ++ ++ MIG KL TKQT ++G + N
Sbjct: 24 DVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICN 83
Query: 641 KVMVAESVNIKRETYFSYCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEG 820
+V+V E +RE YF+ ++P + P+DI EG
Sbjct: 84 QVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEG 143
Query: 821 ISDXVANEIXE 853
I A ++ +
Sbjct: 144 IKKEQALQLAQ 154
>BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for
IMAGE:4996134) protein.
Length = 321
Score = 72.1 bits (169), Expect = 2e-12
Identities = 40/94 (42%), Positives = 48/94 (51%)
Frame = +2
Query: 572 LAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSYCNGEKXXXXXXXXXXXXRY 751
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +
Sbjct: 5 LAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGV 64
Query: 752 GYRGSG*KNPHLVKTVPVDIFEGISDXVANEIXE 853
NP L+ +DIFEGI D A + E
Sbjct: 65 DIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 98
>AB065558-1|BAC05796.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = -1
Query: 681 VSLLIFTLSATITLFTKIPSLGVCLVISLFPIIFLAKSTILSRFFVR*TPPLNP 520
+S + TLSA I + T G C+ I ++P LA + L+ F+ TP LNP
Sbjct: 233 LSKALSTLSAHIIVVTLF--FGPCIFIYVWPFSSLASNKTLAVFYTVITPLLNP 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,152,825
Number of Sequences: 237096
Number of extensions: 1962401
Number of successful extensions: 2791
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2767
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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