Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N14
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-3|AAA83304.1|  415|Caenorhabditis elegans Hypothetical pr...   125   4e-29
Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical pr...   103   2e-22
Z32679-2|CAA83592.1|  385|Caenorhabditis elegans Hypothetical pr...    29   3.3  

>U41557-3|AAA83304.1|  415|Caenorhabditis elegans Hypothetical
           protein C50F7.4 protein.
          Length = 415

 Score =  125 bits (302), Expect = 4e-29
 Identities = 69/168 (41%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
 Frame = +2

Query: 335 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNAL-SGFKADEYVVKAQILAGGRGKGH 511
           R LNLQE  SK++L K+  S+Q+F +  ++ +       F   EYVVKAQILAGGRGKG 
Sbjct: 18  RFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGK 77

Query: 512 FDNGFKG--GVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETY 685
           F NG KG  GV +TK +D  ++    MIG +L+TKQT  EG+ V+KVM+AE V+IKRETY
Sbjct: 78  FINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETY 137

Query: 686 FSYCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGISD 829
            +     +                     K P  +   P+DI  G+++
Sbjct: 138 LAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTE 185


>Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical
           protein F47B10.1 protein.
          Length = 435

 Score =  103 bits (247), Expect = 2e-22
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
 Frame = +2

Query: 287 LINLASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRII-DSKLDTNALSGFKADE 463
           L+N +     P   + R L L EHH   +L+ Y++ +  F +  D++   +        +
Sbjct: 9   LLNTSQKFMAP---AARTLMLHEHHGMKILQNYEIKVPPFGVAQDAETAFSEAKRIGGKD 65

Query: 464 YVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNK 643
           YVVKAQ+LAGGRGKG F +G +GGV +    D++   A  MIG  LITKQT   G    +
Sbjct: 66  YVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEE 125

Query: 644 VMVAESVNIKRETYFSYCNGEKXXXXXXXXXXXXRYGYRGSG*KNPHLVKTVPVDIFEGI 823
           VMV + +  +RE YFS                            NP  +  +P+D+  GI
Sbjct: 126 VMVCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGI 185

Query: 824 SDXVANEI 847
           +  +A+EI
Sbjct: 186 TKELAHEI 193


>Z32679-2|CAA83592.1|  385|Caenorhabditis elegans Hypothetical
           protein C05B5.2 protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -3

Query: 799 NCFHQMWVFSATASIS--IPPAGEATMAAPLKLLSITITKVCLSFDIHTFCDHNFIY 635
           +CF + + F     I+  +P + E TM   L +LS+T+T V L   +       F++
Sbjct: 284 HCFLKKYGFLVAMGIAGNVPNSREVTMIIELDMLSLTLTLVLLYLQLKKSVAEEFVF 340


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,690,102
Number of Sequences: 27780
Number of extensions: 316707
Number of successful extensions: 647
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)