SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N09
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0724 - 35757228-35757323,35757837-35757893,35757983-357580...    73   3e-13
05_02_0135 - 6965294-6965875                                           36   0.057
06_01_0082 + 656362-657798                                             33   0.23 
04_04_1475 + 33856351-33856582,33857614-33857781,33858156-338582...    32   0.71 
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309...    31   0.94 
11_06_0289 - 21969248-21973516                                         31   1.2  
11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553...    31   1.6  
03_05_0261 - 22470565-22470714,22472101-22474270,22474368-224745...    31   1.6  
03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,453...    31   1.6  
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230           31   1.6  
11_06_0284 + 21909758-21913645                                         30   2.2  
08_01_0618 - 5394841-5395036,5395179-5395244,5395727-5395769,539...    30   2.2  
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225...    30   2.2  
07_01_1104 - 10160493-10160599,10160632-10160637,10160930-101609...    30   2.9  
03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467     30   2.9  
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744...    30   2.9  
08_01_0626 - 5445676-5446687,5447099-5447430                           29   3.8  
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012...    29   3.8  
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774...    29   3.8  
04_04_0877 + 29018168-29018279,29019013-29019230,29019333-29019713     29   3.8  
03_02_0619 + 9904405-9904586,9905315-9906764,9907320-9907509,990...    29   3.8  
01_01_0231 + 1951047-1951499                                           29   3.8  
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457           29   3.8  
01_01_0229 - 1943473-1943922                                           29   3.8  
11_06_0185 + 21018045-21022307                                         29   5.0  
03_05_0483 - 24806984-24808324                                         29   5.0  
07_03_1214 + 24931142-24932314,24934177-24934434                       29   6.6  
03_02_0677 + 10343089-10343604,10344316-10344462,10344539-103446...    29   6.6  
10_01_0209 + 2236530-2237301,2239196-2239297,2239535-2239716,224...    28   8.7  
04_04_0491 - 25605560-25605684,25605826-25605928,25606026-256075...    28   8.7  
04_03_0357 + 14852584-14853058,14853116-14855754                       28   8.7  
01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,317...    28   8.7  

>03_06_0724 -
           35757228-35757323,35757837-35757893,35757983-35758075,
           35758271-35758336,35758444-35758653,35758750-35759022,
           35759112-35759251,35759330-35759471
          Length = 358

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
 Frame = +3

Query: 150 PNKKNKEIDTNSESEK--EQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIK 323
           P K+ K  + +S+ E+    D     DSD DSD        +QADF   +P+  DFHG+K
Sbjct: 58  PPKRAKRAEPSSDEERYSSDDESYSSDSD-DSDDASEELDTVQADFAFYDPKPGDFHGVK 116

Query: 324 QLLRQLFLKSNVDLGGLAQIIISQNYIGSVVK----QCLXXXXXXXXXXXXXXXXVFGVT 491
            LL+        DL G   +I+ Q  +G+VVK    +                  +FG+ 
Sbjct: 117 LLLKTYLDSKPWDLTGFVDLILEQTTVGTVVKIADDEEDGEGNGADGSSTGGNDDLFGLI 176

Query: 492 TVVNITKRKNEPSVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIP 671
           +V+N+ +      +  +++ L  +     D  TK+ +K +L D +   GL++  R +N P
Sbjct: 177 SVLNLGRYSEHRCMKDLKDYLLAVC---GDKDTKKKLKQMLGDKAPDVGLLVCRRFVNFP 233

Query: 672 AAISVPLFASLQTELEKA 725
             +   ++ SL  E+  A
Sbjct: 234 YELVPKMYESLFDEVSWA 251


>05_02_0135 - 6965294-6965875
          Length = 193

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +3

Query: 162 NKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
           + + D +S+S+ + DS S+ DSDFD   +   + +   D +G + +D D
Sbjct: 110 DSDSDHDSDSDHDHDSDSDHDSDFDRGSDSDHDSDSNHDIDGDDNDDDD 158



 Score = 31.5 bits (68), Expect = 0.94
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 165 KEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
           K++D + +   + DS  + DSD DSD ++  + +   D +     DSD
Sbjct: 93  KKLDNDDDDGSDWDSVDDSDSDHDSDSDHDHDSDSDHDSDFDRGSDSD 140



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 174 DTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 302
           D +S+S+ + D     DSD DSD N+  + +   D +  N +D
Sbjct: 122 DHDSDSDHDSDFDRGSDSDHDSDSNHDIDGDDNDDDDDDNNDD 164


>06_01_0082 + 656362-657798
          Length = 478

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +3

Query: 141 AKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFH 314
           A+M  + +K+  TN+ S  ++D   + D D D D     E++   D E  + EDSDF+
Sbjct: 214 AEMQLQLSKKRATNNSSRLDEDDDDDNDDDDDDDEGE--EQQQNNDSEMMDVEDSDFY 269


>04_04_1475 +
           33856351-33856582,33857614-33857781,33858156-33858261,
           33858391-33858442,33858525-33858642,33858736-33858766,
           33858962-33858985,33859075-33859199,33860087-33860168,
           33860319-33860441,33860539-33860592,33860669-33860738,
           33861276-33861309,33861824-33862170
          Length = 521

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 156 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEK 263
           + NK   T   SE E+D   E DSD D +G   G K
Sbjct: 426 RSNKRKKTKDVSESEEDDDEEDDSDDDENGEIKGGK 461


>05_04_0148 -
           18426903-18427106,18430516-18430594,18430752-18430935,
           18431020-18431063,18432028-18432165,18432713-18434511
          Length = 815

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -3

Query: 610 IYLINSLVLG-SAFS*DSFVSNSLICATLGSFFL 512
           + + +SLVL  SA S D  + NSLIC +LG FFL
Sbjct: 524 VLMASSLVLFLSAVSPDFVLGNSLICMSLGVFFL 557


>11_06_0289 - 21969248-21973516
          Length = 1422

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
 Frame = +3

Query: 156 KKNKEIDTNSESEKEQDSGSEK-----DSDFDSDGNYVGEKELQADFEGRNPEDSDFH-- 314
           ++  E+   +E  KEQ +G E+     D+D D D N   + E + + +  + E+   H  
Sbjct: 488 EEQNEVRKETEGRKEQVAGEEEEKEDHDADNDEDSNDDDDDEEEEEEDDDDDEEEPIHLH 547

Query: 315 --GIKQLLRQLFLKS 353
               +Q+LR++F K+
Sbjct: 548 EDQYEQILREVFTKN 562


>11_01_0678 -
           5534879-5534883,5535430-5535529,5535638-5535799,
           5536000-5536966,5537444-5537561,5538682-5538871,
           5538952-5539107,5539296-5540315
          Length = 905

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/51 (35%), Positives = 32/51 (62%)
 Frame = +3

Query: 156 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
           +K+++ + + E E + D G E +SD DSDG+   E +  +D +G + +DSD
Sbjct: 93  EKDEKGEDSDEDESDDDRG-EDESDEDSDGD---ESDEHSD-DGESDDDSD 138


>03_05_0261 -
           22470565-22470714,22472101-22474270,22474368-22474540,
           22474763-22474924,22476420-22476560
          Length = 931

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +3

Query: 168 EIDTNSESEKEQ-DSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLRQLF 344
           EID NSE E+ Q D  SE   +   +   +G     +DF+  N + S+   +  +L +L 
Sbjct: 269 EIDANSEDEQHQGDCNSEDKRNLKFNKETLGTGIFPSDFDNTNVQQSN-DLVNIMLERLK 327

Query: 345 LKSNVDLGGLAQIIISQNYIGSVVK 419
                +L  LA +I++ + + +V++
Sbjct: 328 ALHEDELASLA-VIVATSGLNAVLQ 351


>03_01_0617 +
           4532651-4532893,4534713-4534939,4535077-4535150,
           4535753-4535809,4535940-4536280,4536979-4537047,
           4537152-4537219,4537404-4539569,4540101-4540178,
           4540326-4540437,4540722-4540772,4540886-4540936
          Length = 1178

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 141 AKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
           A    K N + D  + S  E  SGS+ DS+    G+  G +   A     +  DSD
Sbjct: 393 AARDEKVNNDSDGKAGSSSESGSGSDSDSESSDSGSDSGSQSRSAASGSGSSSDSD 448


>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
          Length = 171

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 174 DTNSESEKEQDSGSEKDSDFDSDG-NYVGEKELQADFEGRNPEDSD 308
           + N E   + D G E D D D DG +  GE E + D E    E+ +
Sbjct: 111 EANGEGGSDDDDGGEDDDDEDEDGDDDEGEGEGEDDDEDEEEEEEE 156


>11_06_0284 + 21909758-21913645
          Length = 1295

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
 Frame = +3

Query: 156 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD----FHGIK 323
           +K    +   E +++ D   + D D+D D     E+E + D +  + +D D     H  +
Sbjct: 498 EKEGRKEVGEEEKEDDDDDYDDDDDYDDDDYDDNEEEKKYDDDDDDDDDDDDPIHLHTAQ 557

Query: 324 --QLLRQLFLKS 353
             Q+L+++FLK+
Sbjct: 558 YMQILQEVFLKT 569



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 159 KNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPE 299
           K KE+    + EK++  G E+  + +       EKE +   EG+N E
Sbjct: 452 KEKELKGRKDKEKKEKGGREERKEEEHHEKQEKEKEEERKEEGQNEE 498


>08_01_0618 -
           5394841-5395036,5395179-5395244,5395727-5395769,
           5396119-5396238,5396653-5396731,5396910-5397177,
           5397262-5397305,5397431-5397502,5397756-5397825,
           5397929-5397999
          Length = 342

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 165 KEIDTNSESEKEQDSGSEKDSDFDSD 242
           KE + +   E+EQD+G E DSDF  D
Sbjct: 46  KEDEEDDNYEEEQDAGDEFDSDFGED 71


>01_01_0272 -
           2249662-2249721,2250110-2250335,2250419-2250615,
           2250707-2250955,2251047-2251176,2251473-2251564,
           2251735-2251855,2251940-2252028,2252149-2252271,
           2252379-2252506,2253039-2253147,2253701-2254000
          Length = 607

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 156 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQA 275
           +K KE    S S K+ +   E  SD DSDG+  G+K+ +A
Sbjct: 533 EKAKEFVYGSGSRKKSNGKHENSSDDDSDGSCDGKKKKKA 572


>07_01_1104 -
           10160493-10160599,10160632-10160637,10160930-10160975,
           10161053-10161190,10161275-10161679,10163193-10163330,
           10163401-10163482,10163596-10163943,10164294-10164655,
           10165154-10165209,10166428-10166558,10166564-10166628,
           10169191-10169631
          Length = 774

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 168 EIDTNSESEKEQDSGSEKDSDFDSDG-NYVGEKELQADFE 284
           + D +S+ E E++   E  SDFD+D    +GEK+ + D E
Sbjct: 484 DYDVDSDEEWEEEEPGENLSDFDNDDEEAMGEKDSKHDAE 523


>03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467
          Length = 640

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEG 287
           K  NKK K   TN + +K  +    +D+D D D     + +L+A   G
Sbjct: 120 KKKNKKKKSKKTNLKQKKAAEPKPPRDTDDDEDDEEEADDDLEALLAG 167


>02_05_0958 +
           33073302-33073442,33073839-33073913,33074382-33074497,
           33076863-33076977,33077100-33077228,33078907-33078954,
           33079343-33079469,33079634-33079789,33080031-33080287,
           33080431-33080580,33080660-33080714,33080793-33081088,
           33081252-33081335,33081869-33081941,33082164-33082291,
           33082905-33083090,33083179-33083316,33083394-33083519,
           33083705-33083965
          Length = 886

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +3

Query: 498 VNITKRKNEPSVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPA 674
           +NI  +  + SV+ I + L  LS+       K+L++   ADD+   G   NE     PA
Sbjct: 689 ININDQSKQASVSLILDSLKDLSEAELSTIRKQLLEEFSADDACPLGSHSNESTSQSPA 747


>08_01_0626 - 5445676-5446687,5447099-5447430
          Length = 447

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 174 DTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADF-EGRNPED 302
           D N++ + E++   E+D D D D N V E+E   D  EG + E+
Sbjct: 239 DENNDDDDEEEE-MEEDEDLDEDKNDVVEEEEDEDMDEGEDDEN 281


>07_03_1762 -
           29299328-29299437,29299782-29299871,29300487-29301291,
           29301956-29303278
          Length = 775

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +3

Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
           +++ ++ D + + E+E+    E+D+DFD D +   E+E+  D E    +D D
Sbjct: 110 SRRRRQKDDDDDYEEEE----EEDADFDPDVDEDDEEEVDEDEEEFEQDDDD 157


>04_04_1098 +
           30876785-30876835,30876846-30877171,30877396-30877418,
           30877687-30879392
          Length = 701

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 156 KKNKEIDTNSESEKE-----QDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 302
           KK+   D+ S+SE +     ++  S  DS+ DSDG+Y G+K  +    G+N  D
Sbjct: 306 KKSSRHDSESDSESDHKNARREKSSRHDSESDSDGDY-GKKTTK---HGKNDRD 355


>04_04_0877 + 29018168-29018279,29019013-29019230,29019333-29019713
          Length = 236

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 150 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGN 248
           PN    ++    +S KE+D G   D D+DS+GN
Sbjct: 80  PNTNETKVLRLLKSLKERDGGVYLDEDYDSEGN 112


>03_02_0619 +
           9904405-9904586,9905315-9906764,9907320-9907509,
           9909578-9910164
          Length = 802

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 418 FTTLPM*FCDIIIWASPPRST-FDFRNSCLSSCLIPWKS 305
           F  L   +  I  W  P R   FD  N+ LS  L PWKS
Sbjct: 685 FDRLERKYNKISAWPRPERRLLFDLANTVLSEILAPWKS 723


>01_01_0231 + 1951047-1951499
          Length = 150

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 511 KEKMNPVWHRSENCLQNYLRRMQIPE 588
           KE  N  WHR E     ++RR ++PE
Sbjct: 88  KEDKNDKWHRVERSSGQFMRRFRLPE 113


>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
          Length = 438

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 511 KEKMNPVWHRSENCLQNYLRRMQIPE 588
           KE  N  WHR E     ++RR ++PE
Sbjct: 88  KEDKNDKWHRVERSSGQFMRRFRLPE 113


>01_01_0229 - 1943473-1943922
          Length = 149

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 511 KEKMNPVWHRSENCLQNYLRRMQIPE 588
           KE  N  WHR E     ++RR ++PE
Sbjct: 87  KEDKNDKWHRVERSSGQFMRRFRLPE 112


>11_06_0185 + 21018045-21022307
          Length = 1420

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
 Frame = +3

Query: 156 KKNKEIDTNSESEKEQDSGSEK-----DSDFDSDGNYVGEKELQADFEGRNPEDSDFH-- 314
           ++  E+   +E  KEQ +G E+     D+D D D N   + E + + E  + E+   H  
Sbjct: 487 EEQNEVRKETEGRKEQVAGEEEEKEDHDADNDEDSNDDDDDE-EEEEEDDDDEEEPIHLH 545

Query: 315 --GIKQLLRQLFLKS 353
               +Q+LR++F K+
Sbjct: 546 EDQYEQILREVFTKN 560


>03_05_0483 - 24806984-24808324
          Length = 446

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = +3

Query: 153 NKKNKEIDTNSESEKEQDSGS-EKDSDFDSDGNYVGEKE-LQADFEGRNPEDSD 308
           +++++E D + E + E    S ++DSD D D +  GEKE ++A    R+ EDSD
Sbjct: 382 DEEDEEYDDDEEEDMEAGVASGDEDSD-DDDDDEEGEKEDMEAGVASRD-EDSD 433


>07_03_1214 + 24931142-24932314,24934177-24934434
          Length = 476

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 174 DTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDS 305
           D  S S++E+D   E+D + D D     E+E++ D E   PE S
Sbjct: 294 DVPSSSDEEEDGIEEEDEEEDED-----EEEVEDDGEEAEPESS 332


>03_02_0677 +
           10343089-10343604,10344316-10344462,10344539-10344643,
           10345411-10345509,10345662-10345814
          Length = 339

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDG 245
           N++N E+D +++SE+E+D+G   D D  + G
Sbjct: 306 NEQNAEVDGDADSEEEEDTGM-GDIDLTNSG 335


>10_01_0209 +
           2236530-2237301,2239196-2239297,2239535-2239716,
           2240210-2240420,2240526-2240766,2240861-2241011,
           2241116-2241424
          Length = 655

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 246 NYVGEKELQADFEGRNPEDSDF 311
           N  GE+EL  D EG+NPE S F
Sbjct: 303 NLQGEEELVWDLEGKNPEFSVF 324


>04_04_0491 -
           25605560-25605684,25605826-25605928,25606026-25607592,
           25608694-25610198
          Length = 1099

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/91 (23%), Positives = 39/91 (42%)
 Frame = +3

Query: 510 KRKNEPSVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVP 689
           +R+ EPS       LTK S    +   K++IK +L+D+    G+     ++ I  A  V 
Sbjct: 162 ERRREPSPLTPTSCLTKCSLHGRERDKKQVIKLLLSDEYNCQGVY---SVVPIVGAAGVG 218

Query: 690 LFASLQTELEKAHRKNMLYNFKYXIWISKTY 782
              SL   +         ++ K  +W+ + +
Sbjct: 219 K-TSLVQHIYNDEALRSKFDMKMWVWVCQEF 248


>04_03_0357 + 14852584-14853058,14853116-14855754
          Length = 1037

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 150  PNKKNKEIDTNSESEKEQDSGSEKDSDFDSD 242
            P  ++++ D++SES  E D   E DS+ DS+
Sbjct: 945  PESESEDEDSDSESLVESDEDDEDDSEEDSE 975


>01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,
            3179892-3179999
          Length = 957

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 703  YRLNLRKLIGKICYTTLNTLFGSVKLTLLESHQKCFLQIK 822
            + +NLR+ +G +   T    F  + +++ E    CF +IK
Sbjct: 901  FDINLRRQLGALSSKTFEVFFKLINISISEDETVCFNRIK 940


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,265,368
Number of Sequences: 37544
Number of extensions: 292633
Number of successful extensions: 1304
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -