Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_N09
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical p... 66 2e-11
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 32 0.48
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 32 0.48
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 32 0.64
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 32 0.64
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 32 0.64
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 32 0.64
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 31 1.1
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 31 1.5
U00032-11|AAA50630.1| 189|Caenorhabditis elegans Hypothetical p... 31 1.5
AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical ... 31 1.5
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 30 1.9
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 30 2.6
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical pr... 30 2.6
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 30 2.6
AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical ... 30 2.6
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 30 2.6
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 30 2.6
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ... 29 3.4
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 29 4.5
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 29 4.5
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 29 5.9
U40955-4|AAA81752.1| 297|Caenorhabditis elegans Hypothetical pr... 29 5.9
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 29 5.9
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 29 5.9
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 29 5.9
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 29 5.9
Z92777-1|CAB07166.1| 73|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.8
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 28 7.8
AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical ... 28 7.8
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 28 7.8
>U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical
protein ZK1127.4 protein.
Length = 349
Score = 66.5 bits (155), Expect = 2e-11
Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Frame = +3
Query: 156 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQA-DFEGRNPEDSDFHGIKQLL 332
+K +E + + E+++D E D D D + E+ + DFE P + D GI +L
Sbjct: 30 RKEEEPEPVEDVEEDEDVSDEDDEDIDDEEEDEDEQNIMDFDFEAYPPSEDDRDGIVNML 89
Query: 333 RQLFLKSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITK 512
Q FL++++DL +++ II++ G V+ Q +G+ T V +
Sbjct: 90 TQTFLRTDIDLKAMSEGIIAKAPHGVVLTQA------YDDEETEEDYMAYGLCTTVPLND 143
Query: 513 RKNEPSVAQIRELLTKL---SQENADPRTKELIKYILADDSQHTGLVINERILNIPAAIS 683
K++ + I++L T + +++ A + I+ I + L +NER+LN P +
Sbjct: 144 NKDD-APKFIKDLFTYVLNRAKKGAPTEIYKKIEEIQVSGDGKSALFVNERLLNFPTIVV 202
Query: 684 VPLFASLQTELE--KAHRKNMLYNFKYXI 764
+F S++ +L + K ++Y K I
Sbjct: 203 PQIFGSIREDLSGFETKYKTIIYIQKLRI 231
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFE 284
K+P +D E KE+D ++D D D D V +KE +A E
Sbjct: 1072 KIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQRE 1118
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFE 284
K+P +D E KE+D ++D D D D V +KE +A E
Sbjct: 1072 KIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQRE 1118
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 31.9 bits (69), Expect = 0.64
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD 278
K + +KE + + E EKE+D G EK+ D D + +K+ + D
Sbjct: 1228 KDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSRED 1272
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 144 KMPNKKNKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDSDFHG 317
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9920 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9979
Query: 318 IKQLLRQLFLKSNVD 362
+ + ++ LK +
Sbjct: 9980 VDEKPKKKVLKKKTE 9994
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 144 KMPNKKNKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDSDFHG 317
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9940 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9999
Query: 318 IKQLLRQLFLKSNVD 362
+ + ++ LK +
Sbjct: 10000 VDEKPKKKVLKKKTE 10014
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 144 KMPNKKNKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDSDFHG 317
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9940 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9999
Query: 318 IKQLLRQLFLKSNVD 362
+ + ++ LK +
Sbjct: 10000 VDEKPKKKVLKKKTE 10014
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 141 AKMPNKKNKEIDTNSESEKEQDSGSEKDSD 230
AK+ +K + D++ ES+ SGSE DSD
Sbjct: 546 AKLGKRKRRHRDSDDESDPSSGSGSESDSD 575
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDS---GSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
K KK K+ + + EKE+D +KD D D D +K+ + D + ED D
Sbjct: 295 KKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKD 352
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSD-GNYVGEKELQADFEGRNPEDSD 308
K KK+K+ + + E +K++D +KD D D D N +K+ + D + E+ +
Sbjct: 258 KDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKE 313
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQD---SGSEKDSDFDSDGN 248
K +KK K+ D N E EKE+D +KD D D D N
Sbjct: 179 KKKDKKKKK-DDNDEEEKEKDKKKKDKKKDDDDDEDEN 215
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
K +KK + D E++K++D +KD D + +K+ + + + +D D
Sbjct: 200 KKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDD 254
>U00032-11|AAA50630.1| 189|Caenorhabditis elegans Hypothetical
protein F37A4.2 protein.
Length = 189
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 156 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
KKN E D +S + + DSGS D++ + N E + + + E + E ++
Sbjct: 136 KKNNESDESSSDDSDSDSGSGSDNESEGKQNTEVEDKDKVEKEETDDEKTE 186
>AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical
protein F55A3.7 protein.
Length = 491
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +3
Query: 150 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADF 281
P +++ + SES++++ G E +SD D +G+ ++ +Q F
Sbjct: 446 PEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDEFVQPIF 489
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 159 KNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQ 326
+ K + N E E+E++ EK+ + D + EKE + D E + IK+
Sbjct: 355 EEKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKEKEREKRKSKEKIKE 410
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 156 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 302
KKNKE + E +KE++ EKD + + + EK+ + + E R ++
Sbjct: 360 KKNKEKEREKEKDKEKE--KEKDKEKEKEKEKEKEKDKEKEREKRKSKE 406
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDF 311
+KK+++ SESEK S + D D D D N +K + + + P DF
Sbjct: 31 SKKDRKRKLASESEKS-GSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRDF 82
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDF 311
+KK+++ SESEK S + D D D D N +K + + + P DF
Sbjct: 31 SKKDRKRKLASESEKS-GSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRDF 82
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 132 VYFAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 299
V ++ P +K+KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 132 VYFAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 299
V ++ P +K+KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical
protein F43C1.5 protein.
Length = 221
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD 278
K+P K +K + K+ + D D DG Y+GE E++++
Sbjct: 152 KIPGKNSKNSKISVNKAKKLEPRRRSDEDRVPDGPYIGEGEVKSE 196
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 132 VYFAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 299
V ++ P +K+KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical
protein H06H21.3 protein.
Length = 216
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQA 275
++K+ E + S+ E+E D SE++SD DS D + + E++L A
Sbjct: 152 SEKSDE-EAGSDKEEESDDDSEEESDEDSDDSDNIREEDLAA 192
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +3
Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHG 317
+++ E + ESE+++D ++DS+ D D ++E + + E + E+ + G
Sbjct: 884 DEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEEEEEG 938
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/52 (19%), Positives = 27/52 (51%)
Frame = +3
Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
++ +E + E E E+D E+D D + D + ++ ++++E ++ +
Sbjct: 882 DEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEE 933
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +3
Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHG 317
+++ E + ESE+++D ++DS+ D D ++E + + E + E+ + G
Sbjct: 884 DEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEEEEEG 938
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/52 (19%), Positives = 27/52 (51%)
Frame = +3
Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
++ +E + E E E+D E+D D + D + ++ ++++E ++ +
Sbjct: 882 DEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEE 933
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 150 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
P K+ ++D + + E + D + D D DGN + + D + + D D
Sbjct: 249 PVKEEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGDDDDDDDDGNDDD 301
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 150 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
P K+ ++D + + E + D + D D DGN + + D + + D D
Sbjct: 249 PVKEEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGDDDDDDDDGNDDD 301
>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
protein F55A3.3 protein.
Length = 1030
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 150 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPE 299
P +++ + SES++++ G E +SD D +G+ ++ D+ E
Sbjct: 946 PEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDESEGKDWSDLEEE 995
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 159 KNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGI 320
K EI+T E +KE+++G D D + +Y+GE + E NP F I
Sbjct: 46 KQAEIETREEPKKEEENGD----DLDVEIDYIGE---TIEIEPDNPHAQYFSAI 92
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDS 227
K N K+ + SE + E DSGSEKD+
Sbjct: 483 KQKNDKDSSEGSGSEPDDEYDSGSEKDA 510
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 645 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYXIWISKTYTTGESSEVLFANQE 824
INER L + V +F +L+ ++ L FK IW+ K Y +++ ++
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIYEKSNLKKLIDSSAA 184
Query: 825 XKS 833
K+
Sbjct: 185 QKN 187
>U40955-4|AAA81752.1| 297|Caenorhabditis elegans Hypothetical
protein F48B9.2 protein.
Length = 297
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 153 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDF 311
++K EID N+ E+++ S SE ++ ++ GEK + + ++SD+
Sbjct: 159 DEKTNEIDLNTYFEQDEASDSEPKTEMETQVESSGEKIIILFESEESQDESDY 211
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 302
K +K++ E T SE + E DSGSE+DS + E+++ + P++
Sbjct: 480 KKEDKESSE-GTGSEPDDEYDSGSEQDSSGTGESEPDSEQDVPSKRRKGEPKE 531
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 645 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYXIWISKTYTTGESSEVLFANQE 824
INER L + V +F +L+ ++ L FK IW+ K Y +++ ++
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIYEKSNLKKLIDSSAA 184
Query: 825 XKS 833
K+
Sbjct: 185 QKN 187
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 162 NKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDF 311
+ EID ++ESE+ +D S+ + D D GE+ +Q + E DS F
Sbjct: 678 SSEIDWDAESEEVEDEESDDSDEEDEDD---GERLVQLNTETSTGADSVF 724
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 159 KNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 308
K E D + + K++ G D +SDG E E + + EG + EDSD
Sbjct: 702 KLDESDEDEDELKDRKHGLFDDEASESDGEDEFEDEDEEEPEGEDLEDSD 751
>Z92777-1|CAB07166.1| 73|Caenorhabditis elegans Hypothetical
protein C17H1.2 protein.
Length = 73
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 159 KNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFH 314
+N+ +TN SE D G DF S + EK+LQAD D +FH
Sbjct: 3 ENESENTNVFSEFLYDIG-----DFFSGNDRKQEKQLQADLRAAQAADLEFH 49
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +3
Query: 156 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLR 335
+K +E + E EKE++ EK + + + EKE + + E R ++ + ++R
Sbjct: 231 EKEREKEREKEREKEREKEREKQKEREKEREKEREKEKKREEEARRKKEEASTPV--IIR 288
Query: 336 QLFLKSNVDLGG 371
L + + D G
Sbjct: 289 PLLSQEDDDSNG 300
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 144 KMPNKKNKEIDTNSESEKEQDSGSEKDSD 230
K+ +K + + + +K++D+G EKD D
Sbjct: 1194 KLAKRKRDDAEKKKKGDKDEDAGPEKDDD 1222
>AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical
protein T22B11.4b protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 162 NKEIDTNSESEKEQDSGSEKDSDFDS 239
++E T SE ++E+DS S++D D +S
Sbjct: 435 DEETTTTSEDDEEKDSNSDEDEDEES 460
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 162 NKEIDTNSESEKEQDSGSEKDSDFDS 239
++E T SE ++E+DS S++D D +S
Sbjct: 435 DEETTTTSEDDEEKDSNSDEDEDEES 460
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,980,847
Number of Sequences: 27780
Number of extensions: 289707
Number of successful extensions: 1446
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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