Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N08
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...   202   3e-52
AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical ...    47   2e-05
AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical ...    47   2e-05
AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical ...    30   1.9  
AC006671-4|AAF39917.1|  373|Caenorhabditis elegans Hypothetical ...    30   2.5  
AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm rec...    29   5.8  

>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score =  202 bits (492), Expect = 3e-52
 Identities = 93/134 (69%), Positives = 109/134 (81%)
 Frame = +3

Query: 153 LKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILS 332
           L+D AN++RI SI  T ASKSGHPTS  S AEIMS LFF  M+Y ++ P+ ASADRF+LS
Sbjct: 11  LEDAANRMRISSIEMTCASKSGHPTSSTSAAEIMSTLFFSEMKYDVAEPKSASADRFVLS 70

Query: 333 KGHAAPILYAAWAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTGSLGQGLAVAAG 512
           KGHA PILYAAW EAGL   +++ +LRK+DSD+EGHPTPRLNF+DV TGSLGQGL VA G
Sbjct: 71  KGHACPILYAAWEEAGLLSHEQVLSLRKIDSDIEGHPTPRLNFIDVATGSLGQGLGVATG 130

Query: 513 MAYVGKYFDQAPYR 554
           MAYVGKY D+A YR
Sbjct: 131 MAYVGKYIDKASYR 144



 Score =  144 bits (350), Expect = 6e-35
 Identities = 64/107 (59%), Positives = 83/107 (77%)
 Frame = +1

Query: 559 YCLVGDGEAAEGSIWESLHFASHYKLDNLVVIFDVNRLGQSEPTSLQHQLEVYDARLKAF 738
           +CL+GDGE+AEGS+WE+  FAS YKLDNLV I DVNRLGQS+ TSL H +E Y AR  AF
Sbjct: 146 FCLLGDGESAEGSVWEAAAFASIYKLDNLVAIVDVNRLGQSQATSLGHDVETYKARFAAF 205

Query: 739 GLNSLVVDGHDVTELVKAFDEAASVTGKPTALVAXTYKGRGFRGXED 879
           G N+++V+GH+V EL+ A++ A S  GKPTA++A T KG+G  G E+
Sbjct: 206 GFNAIIVNGHNVDELLAAYETARSTKGKPTAIIAKTLKGKGIEGIEN 252


>AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3b protein.
          Length = 432

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +1

Query: 571 GDGEAAEGSIWESLHFASHYKLDNLVVIFDVNRLGQSEPTSLQHQLEVYDARLKAFGLNS 750
           GDG A+EG    + +FA+  K   ++     N    S PTS Q+  +    +  A+GL++
Sbjct: 222 GDGAASEGDAHAAFNFAATLKCP-IIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHT 280

Query: 751 LVVDGHDVTELVKAFDEA--ASVTGKPTALVAXTYK 852
           + VDG+D+  +  A  EA   ++T +P  + A TY+
Sbjct: 281 IRVDGNDLLAVYNATKEARRVALTNRPVLIEAMTYR 316


>AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3a protein.
          Length = 431

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +1

Query: 571 GDGEAAEGSIWESLHFASHYKLDNLVVIFDVNRLGQSEPTSLQHQLEVYDARLKAFGLNS 750
           GDG A+EG    + +FA+  K   ++     N    S PTS Q+  +    +  A+GL++
Sbjct: 221 GDGAASEGDAHAAFNFAATLKCP-IIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHT 279

Query: 751 LVVDGHDVTELVKAFDEA--ASVTGKPTALVAXTYK 852
           + VDG+D+  +  A  EA   ++T +P  + A TY+
Sbjct: 280 IRVDGNDLLAVYNATKEARRVALTNRPVLIEAMTYR 315


>AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical
           protein C44B12.5 protein.
          Length = 397

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = +1

Query: 391 WTS*RTCASWTRTWRATPPRDSTSWTSAPA---PWARGSPWRPAW 516
           W S  T  S   +W A P   STSW +APA    W       P W
Sbjct: 334 WQSENTAPS--TSWGAAPAAPSTSWGAAPAAPPTWGGAPTAAPTW 376


>AC006671-4|AAF39917.1|  373|Caenorhabditis elegans Hypothetical
           protein K08A2.4 protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = -1

Query: 732 LQARVVHFQLMLQRGGLGLPQTVNIEDDDQVVQLVVAGEVQRLPDAALGRLSVAHQA 562
           L+  V  +  ML+ G     +   I+ DD++++ VV  E++++PD   G  +   QA
Sbjct: 28  LRITVQEYMAMLKSGR----KVYEIKPDDRILKKVVMSEIEKIPDMWAGEKNTNRQA 80


>AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm
           receptor protein 206 protein.
          Length = 364

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +2

Query: 155 KRYRQQTKN----RQYCCYKRLKVWSSDIMRVNGGDNVCSLLPHNAV 283
           K YR+  KN       CC K  K +SS +  V   D   S +P N V
Sbjct: 310 KNYREGVKNFCLAPIQCCIKLKKKYSSKVANVEVSDRRSSSIPENGV 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,764,874
Number of Sequences: 27780
Number of extensions: 322184
Number of successful extensions: 1054
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)