Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N07
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical ...    29   5.7  
Z27079-6|CAA81594.1|  288|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical
           protein ZK973.2 protein.
          Length = 865

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -1

Query: 385 LSNNVLSVADPELVAVLHGVPSLVNDQVVDYILDDGTP 272
           L +++L+V D  L  +LHG  +  N ++V++++  G P
Sbjct: 509 LPHHILTVQDLNLNTLLHGAINSENFELVEFLIHMGAP 546


>Z27079-6|CAA81594.1|  288|Caenorhabditis elegans Hypothetical
           protein T05G5.6 protein.
          Length = 288

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +2

Query: 305 LIIDKRRNTMEYCYKLWVGNGQHIVRKYFPFNFXTHHGRKLRQAHFQKLQPRSEAR 472
           LI+   +  +   Y+L +  G H  R+ F   F T   ++   A  +K +P+ E++
Sbjct: 233 LIVQMAKEAVNKAYELTLQEGLHFERRLFHATFATKDRKEGMTAFAEKRKPQWESK 288


>Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical
           protein C25F9.5 protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 476 HNQSLERKTCIRRWCRQAD*TRQLEVHYLVGEQQSV 583
           H Q L + + + RWC   + T +   H+L G    +
Sbjct: 357 HYQKLLQLSVMHRWCLTEENTHRFSAHFLKGNNDKI 392


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,465,382
Number of Sequences: 27780
Number of extensions: 319006
Number of successful extensions: 1035
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)