Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N03
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1042 + 8187536-8187616,8187713-8188315                           32   0.53 
01_01_1008 - 7987936-7988628,7988923-7989102                           31   0.93 
12_01_0816 + 7502669-7503145                                           29   5.0  
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   5.0  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   5.0  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
05_05_0258 - 23656473-23657828                                         28   8.7  

>06_01_1042 + 8187536-8187616,8187713-8188315
          Length = 227

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 27/82 (32%), Positives = 36/82 (43%)
 Frame = -2

Query: 849 FLPG*LKTIVTG*GAAVGLNGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVS 670
           F P    T+ T  G +    GG    A+  A    RTE   A  +  R A   E+G +  
Sbjct: 32  FFPDRSTTLGTLMGVSAFGGGGQRRAARTPA----RTERERA-PLAARPAGEEEEGRRAG 86

Query: 669 GKRQGRNRRAXRGSXPGGNAWY 604
           G R+ R RR  RGS   G +W+
Sbjct: 87  GWRRRRRRRQRRGSRSLGGSWW 108


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 714 RKRHASRREKGGQVSGKRQGRNRRAXRGSXPG 619
           R R   RR  GG+V+G+   R+RR  RG+  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEG 270


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 811 RRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 680
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 755 FAPSWAVCTNPPFSPTAAPYPVTIVLSQP 841
           F P  AV   PP  P AAP PV + +  P
Sbjct: 67  FVPFHAVGPPPPPQPRAAPPPVAVAMGSP 95


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = +2

Query: 530 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRCALLFRPC--RLPDTCPPFSLR 697
           L PP          Q+WR+  PTG   + +FP G LP  A   +P   R P T P F  R
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPAT-PLFPSR 71

Query: 698 EAWRFLIAHAVGISVRCRSFAP 763
            A      + + + +   +F P
Sbjct: 72  VAEGLFGLNGIEVGIEGDNFTP 93


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 290 NESAN---ARGEAVCVLGALPLPRSLTRCAR 373
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>05_05_0258 - 23656473-23657828
          Length = 451

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 878 PVAAARAISXFYRVDSRR*LPDKAQRSG*TGGSCTQPSLE 759
           P  A R    F+RV S +  PD+A   G    +  +P+LE
Sbjct: 206 PYEAGRRTHAFWRVQSAKAFPDQAAAMGHGSDAIDEPALE 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,761,550
Number of Sequences: 37544
Number of extensions: 535140
Number of successful extensions: 1656
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)