Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_N03
         (892 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ535362-1|ABF83305.1|  129|Homo sapiens circulating B cell anti...    31   4.2  
AK024458-1|BAB15748.1|  270|Homo sapiens FLJ00050 protein protein.     31   4.2  
AK094751-1|BAC04412.1|  157|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   5.6  
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        31   7.4  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        31   7.4  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       31   7.4  

>DQ535362-1|ABF83305.1|  129|Homo sapiens circulating B cell
           antibody heavy chain variable region protein.
          Length = 129

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = -3

Query: 671 PVSGRVGTGERXEG----AXQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 504
           P SG  G+ ++ +G         T   ++ LSG  + D +V FC    GGG      A R
Sbjct: 55  PYSGNTGSAQKFQGRVTMTRDTSTSTAYMELSGLTSDDSAVYFCARGGGGGI---AVAGR 111

Query: 503 PFYG 492
            +YG
Sbjct: 112 SYYG 115


>AK024458-1|BAB15748.1|  270|Homo sapiens FLJ00050 protein protein.
          Length = 270

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 803 AAPYPVTIVLSQPGKNXLSPWQQP 874
           +AP   ++VL QPG   LSPW++P
Sbjct: 180 SAPQDKSLVLPQPGLTGLSPWRRP 203


>AK094751-1|BAC04412.1|  157|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37432 fis, clone BRAWH2001701, weakly similar to
           Homo sapiens testes development-related NYD-SP22 mRNA.
           ).
          Length = 157

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 521 FHRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFP-PGKLPRCALLFRPCRLP 670
           F  LRPP       +   R   P+    ++A P P   PRC L  RPCR+P
Sbjct: 102 FAGLRPPQPGSTPHKPRPRTPPPSSPASFRAGPQPALAPRCTLS-RPCRVP 151


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -3

Query: 545 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYXPDSV 429
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +1

Query: 640 RSPVPTLPLTGYLSAFLPSGSVALSHS 720
           R PV T+P+   L AF   GSV LSHS
Sbjct: 163 RGPVATIPIVLLLKAFPYCGSVVLSHS 189


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 690 EKGGQVSGKRQGRNRRAXRGSXPGGNA 610
           EKG +VSGKR+GRN  A   S    +A
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASA 29


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 690 EKGGQVSGKRQGRNRRAXRGSXPGGNA 610
           EKG +VSGKR+GRN  A   S    +A
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASA 29


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 690 EKGGQVSGKRQGRNRRAXRGSXPGGNA 610
           EKG +VSGKR+GRN  A   S    +A
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASA 29


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,416,192
Number of Sequences: 237096
Number of extensions: 2766467
Number of successful extensions: 13190
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13185
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)