Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_M19
(859 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC212.01c |||S. pombe specific DUF999 family protein 2|Schizos... 32 0.12
SPBCPT2R1.04c |||S. pombe specific DUF999 protein family 10|Schi... 32 0.12
SPAC750.06c |||S. pombe specific DUF999 protein family 4|Schizos... 32 0.12
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 31 0.28
SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po... 29 0.64
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 29 1.1
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 29 1.1
SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa... 28 1.5
SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos... 28 1.5
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 28 1.5
SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr... 28 2.0
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 27 2.6
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 27 3.4
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.4
SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|... 27 4.5
SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces pombe... 26 6.0
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 26 7.9
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 26 7.9
>SPAC212.01c |||S. pombe specific DUF999 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 575 VLTGIVGIRLTAVLGGTIAALGLIVSSFVVDNINALYFTYSIMYGL 712
VL ++G+ + AVLG IAALG+I+++ LYF + +Y L
Sbjct: 182 VLGAVLGM-IIAVLGMIIAALGMIIAALGATITGLLYFGHWALYKL 226
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 578 LTGIVGIRLTAVLGGTIAALGLIVSS 655
+TG++ L AVLG IA LG+I+++
Sbjct: 175 VTGVIIAVLGAVLGMIIAVLGMIIAA 200
>SPBCPT2R1.04c |||S. pombe specific DUF999 protein family
10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 280
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 575 VLTGIVGIRLTAVLGGTIAALGLIVSSFVVDNINALYFTYSIMYGL 712
VL ++G+ + AVLG IAALG+I+++ LYF + +Y L
Sbjct: 182 VLGAVLGM-IIAVLGMIIAALGMIIAALGATITGLLYFGHWALYKL 226
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 578 LTGIVGIRLTAVLGGTIAALGLIVSS 655
+TG++ L AVLG IA LG+I+++
Sbjct: 175 VTGVIIAVLGAVLGMIIAVLGMIIAA 200
>SPAC750.06c |||S. pombe specific DUF999 protein family
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 575 VLTGIVGIRLTAVLGGTIAALGLIVSSFVVDNINALYFTYSIMYGL 712
VL ++G+ + AVLG IAALG+I+++ LYF + +Y L
Sbjct: 182 VLGAVLGM-IIAVLGMIIAALGMIIAALGATITGLLYFGHWALYKL 226
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 578 LTGIVGIRLTAVLGGTIAALGLIVSS 655
+TG++ L AVLG IA LG+I+++
Sbjct: 175 VTGVIIAVLGAVLGMIIAVLGMIIAA 200
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 30.7 bits (66), Expect = 0.28
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 672 MLSTTNEDTIKPSAAMVPPNTAVKRIPTIPVSTPDKGDNKNVIPIVKAPT 523
M+ TT TI P AAM P IPT+ +T + + P+V+ T
Sbjct: 79 MVETT---TILPMAAMTTPMVETTTIPTVETTTTPMVETTTITPMVETTT 125
>SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 161
Score = 29.5 bits (63), Expect = 0.64
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 587 IVGIRLTAVLGGTIAALGLIVSSFVVDNINALYFTYSIMYGLGASFA 727
IV + V+ G IA GL+VS + N+ + YS LGA +
Sbjct: 51 IVKNTIPVVMAGIIAIYGLVVSVLISGNLKQILSLYSGFIQLGAGLS 97
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = -2
Query: 660 TNEDTIKPSAAMVPPNTAVKRIPTIPVSTPDKGDNKNVIPIVKAPTRAARLSSFVAPCSF 481
TN KPS P NT ++ +T + N N +PI L + S+
Sbjct: 98 TNTSISKPSQTATPQNTNTTQVSLTNGTTTNSYSNTNSLPITDTINGTTEL--IIPTTSY 155
Query: 480 NIISRT-GYTTLQEFITPKSS 421
N S T Y+T P S+
Sbjct: 156 NNQSHTLIYSTYTSTYLPNST 176
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 630 PHLV*LYLRSLLTTSMLSILHIVLCMVW---EHLLLIPRSLAILGHYFKKHLGLVNGLVT 800
P+ V +YL+ L +L++LHI + ++W EH+L+ ++ H +++ V L
Sbjct: 165 PYNVAIYLQRCLL--ILAVLHIPVALIWLNLEHILIFLHQDPMVAHLCGRYM-RVFILAA 221
Query: 801 VGSSVFTA 824
G +VF A
Sbjct: 222 PGYAVFEA 229
>SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein
family 9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 587 IVGIRLTAVLGGTIAALGLIVSSFVVDNINALYFTYSIMYGL 712
+ G+ + AVLG IA LG+I+++ LYF + +Y L
Sbjct: 175 VTGV-IIAVLGMIIAVLGMIIAALGATITGLLYFGHWALYKL 215
>SPBC1348.01 |||S. pombe specific DUF999 protein family
5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 587 IVGIRLTAVLGGTIAALGLIVSSFVVDNINALYFTYSIMYGL 712
+ G+ + AVLG IA LG+I+++ LYF + +Y L
Sbjct: 175 VTGV-IIAVLGMIIAVLGMIIAALGATITGLLYFGHWALYKL 215
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 663 TTNEDTIKPSAAMVPPNTAVKRIPTIPVSTPDKGDNKNVIP 541
T E TI P A P + K ++P+ D D+K +P
Sbjct: 235 TVIESTIAPQQATTHPPSQPKNAVSVPIPKMDSTDSKGELP 275
>SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 599
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 663 LTTSMLSILHIVLCMVWEHLLLIPRSLAILGHYFKKHLGL 782
L ++ + L +V+ M+ +H+L P SLAI HY H+ L
Sbjct: 143 LISAQSNYLPLVMTMLIQHMLYRPDSLAI--HYEHAHMAL 180
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 27.5 bits (58), Expect = 2.6
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 564 GDN--KNVIPIVKAPTRAARLSSFVAPCSFNIISRTGYTTLQEFITPKSSPLVKNDARTT 391
GDN N +P V A LSS V P F I+ +GY L ++ SS ++ ++A T
Sbjct: 134 GDNYKDNGVPYVTIRAWPALLSSLVPPVVFLIMKESGYDLLACIVS--SSLVLFDNAHVT 191
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 759 YFKKHLGLVNGLVTVGSSVFTAFIPSLMEYML 854
Y ++HLGL N + + A IP MEY +
Sbjct: 85 YAREHLGLPNKYIALCLGSHAATIPGCMEYKM 116
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 642 KPSAAMVPPNTAVKRIPTIPVSTPDKGDNKNVIPIVKAPTR 520
KP+++ P N A + P P S P N + +P + PT+
Sbjct: 428 KPASSAAPSNPAPWQQPAAPQSAPALSMNPSSLPPWQQPTQ 468
>SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 483
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -3
Query: 671 CCQQRTKIQLNQVRRWFRLIQPSSVFPLFLSALQTKATTKTS 546
CC++ + +V FRL +F + + LQ+ T K S
Sbjct: 373 CCKKAIDLAAQEVSLTFRLFAELGIFSVLFTKLQSVITQKYS 414
>SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 532 GTNQSSTALFICGSLFF*YYLENGIYNTAGIY 437
G +T+LF+ G+ FF Y E G++N IY
Sbjct: 243 GYEIEATSLFVIGNFFFFY--EMGLFNIPVIY 272
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 554 LLSPLSGVLTGIVGIRLTAVLGGTIAALGLIVSSFVVDNINALYFTYSIMYGLGAS 721
LL+PL + G V+ +AAL + ++ DN++ L F+Y+ + + AS
Sbjct: 100 LLNPLLSNIIPFYGASKPLVVH--VAALAYLEQTYCADNVSVLDFSYANNFTVFAS 153
>SPAPB8E5.07c |||ribosome biogenesis protein
Rrp12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1163
Score = 25.8 bits (54), Expect = 7.9
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 416 NGLLFGVINSCSVVYPVLEIILKEQGATNEESRAALVGALTMGMTF 553
N GVIN V+ +E LKEQ T A LV LT+ F
Sbjct: 17 NSSTAGVINEFDVIVSAVEGTLKEQ-KTEATPTAYLVALLTLVKEF 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,187,054
Number of Sequences: 5004
Number of extensions: 66066
Number of successful extensions: 192
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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