Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_M13
         (905 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.19 
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   7.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 0.19
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 782 PPPPPRXGXXPPPXXGXXXGG 844
           PPPPP  G  P P  G   GG
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGG 605



 Score = 23.8 bits (49), Expect = 7.3
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -3

Query: 675 PPPXXXXGXPXGGXXXXXPP 616
           PPP    G P GG     PP
Sbjct: 593 PPPSPLAGGPLGGPAGSRPP 612



 Score = 23.8 bits (49), Expect = 7.3
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 674 PPPXXXXGXPXGXXXGXXPP 615
           PPP    G P G   G  PP
Sbjct: 593 PPPSPLAGGPLGGPAGSRPP 612


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 518 FXPPXXPRXXFGGEFXFXRXXF 453
           F PP  PR  FGG   + R  F
Sbjct: 92  FRPPWHPRPPFGGRPWWLRPPF 113


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 782 PPPPPRXGXXPPP 820
           P PPP  G  PPP
Sbjct: 108 PLPPPMMGMRPPP 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.148    0.523 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,208
Number of Sequences: 2352
Number of extensions: 10267
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)