Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_M12
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine re...    31   0.84 
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U55857-1|AAA98026.1|  394|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 68 protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 103 NTLEYILNCDRFRCSRQEC 47
           NT++  +NCD FRCS  EC
Sbjct: 149 NTIDTPMNCDHFRCSFNEC 167


>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
           protein ZC84.6 protein.
          Length = 1474

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +1

Query: 28  GNSLRFDILVSSSETCHNSKCIPRCCYPLHSLYA*TL-KFLCLLVTQRSIRSPANFQSQS 204
           GN   F+ LV     C N+   PRC  P    Y     KF+     ++S   PANF+   
Sbjct: 474 GNDNNFETLVDCQTFCRNAAPEPRC--PQGQAYKDNQGKFVTCTTNRQSSSCPANFECYF 531

Query: 205 D 207
           D
Sbjct: 532 D 532


>U55857-1|AAA98026.1|  394|Caenorhabditis elegans Hypothetical
           protein K08D10.10 protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 770 YRTQINSYKSIDFYNNFFRQNFIHTSR 690
           ++ QI  Y  I F +  FRQN +HT++
Sbjct: 59  FKMQIRQYVMIPFNSPIFRQNQLHTTK 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,192,080
Number of Sequences: 27780
Number of extensions: 378170
Number of successful extensions: 942
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)