Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_M11
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0026 - 31118997-31119113,31119700-31119900,31120032-311202...   102   3e-22
01_06_1361 - 36663859-36663985,36664353-36664543,36664746-366650...    97   2e-20
10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657     29   3.6  

>03_06_0026 -
           31118997-31119113,31119700-31119900,31120032-31120218,
           31120339-31120415,31120738-31120815,31120858-31120974,
           31121047-31121175,31121327-31121479,31121589-31122044,
           31122122-31122239,31122385-31122575,31123140-31123415,
           31123524-31123700,31124040-31124141,31124227-31124459,
           31125563-31125764
          Length = 937

 Score =  102 bits (245), Expect = 3e-22
 Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
 Frame = +2

Query: 530 RLAACFLDSMATLGLAAYGYGIRYEYGIFAQKIENGEQQEEPDDWLRFGNPWEKARPEFM 709
           RLA+CFLDS+ATL   A+GYG+RY++G+F        Q+E  ++WL  GNPWE  R +  
Sbjct: 192 RLASCFLDSLATLNYPAWGYGLRYKHGLFKANHTKDGQEEVAENWLEMGNPWEIVRTDVS 251

Query: 710 LPVNFYGSVVDTPDGKNGLI--HRWYLQCHTIPYSWLYNNVVNTLRLWSAKXP 862
            PV FYG VV+  DG+   I      +  H IP         N LRLWS   P
Sbjct: 252 YPVKFYGKVVEGTDGRMHWIGGENIKVVAHDIPIPGYKTKTTNNLRLWSTTVP 304



 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 27/73 (36%), Positives = 38/73 (52%)
 Frame = +1

Query: 217 HVHYTLVKDRNVATPRDYYFALAHTVKDHLVSRWIRTQQYYYENDPKRVYYLSLEYYMGR 396
           H  +T V      +P   Y A A +V D L+  W  T  YY   + K+ YYLS+E+  GR
Sbjct: 88  HAEFTPVFSPEHFSPLKAYHATAKSVLDTLIMNWNATYDYYDRTNVKQAYYLSMEFLQGR 147

Query: 397 SLQNTMINLGIQG 435
           +L N + NL + G
Sbjct: 148 ALTNAVGNLELTG 160


>01_06_1361 -
           36663859-36663985,36664353-36664543,36664746-36665009,
           36665215-36665373,36665476-36665679,36665765-36665983,
           36666191-36666322,36666406-36666523,36666670-36666854,
           36667263-36667355,36667819-36668008,36668500-36668585,
           36668671-36668847,36669141-36669320,36669423-36669623
          Length = 841

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = +2

Query: 530 RLAACFLDSMATLGLAAYGYGIRYEYGIFAQKIENGEQQEEPDDWLRFGNPWEKARPEFM 709
           RLA+CFLDSMATL L A+GYG+RY YG+F Q I    Q+E  +DWL   +PWE  R + +
Sbjct: 140 RLASCFLDSMATLNLPAWGYGLRYRYGLFKQCITKEGQEEIAEDWLEKFSPWEIVRHDIV 199

Query: 710 LPVNFYGSVVDTPDGKNGLIHRWYLQ--CHTIPYSWLYNNVVNTLRLWSAK 856
            P+ F+G V   PDG    +    L    + +P          +LRLW AK
Sbjct: 200 YPIRFFGHVEILPDGSRKWVGGEVLNALAYDVPIPGYKTKNAISLRLWDAK 250



 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = +1

Query: 259 PRDYYFALAHTVKDHLVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQG 435
           P   +++ A +V+DHLV RW  T  ++++ DPK+ YYLS+EY  GR+L N + NLGI G
Sbjct: 50  PEQAFYSTAESVRDHLVQRWNETYLHFHKTDPKQTYYLSMEYLQGRALTNAVGNLGITG 108


>10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657
          Length = 1032

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3

Query: 618 ANIPYSYLIPYPYAAR 571
           AN PYSY IP PY+A+
Sbjct: 106 ANYPYSYAIPVPYSAQ 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,171,343
Number of Sequences: 37544
Number of extensions: 465131
Number of successful extensions: 1034
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)