Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_M09
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791...    33   0.40 
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948...    29   5.0  
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833...    29   6.6  
07_03_0633 + 20120560-20123464,20123608-20123672                       29   6.6  
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367...    28   8.7  
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718     28   8.7  

>01_03_0205 +
           13777918-13778015,13778402-13778624,13779022-13779198,
           13779277-13779437,13779520-13780519,13780923-13781069,
           13781149-13781376,13781471-13781628,13781807-13782161
          Length = 848

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 463 RRPPPAKPYTEIKRLPKLVDVSQGHWEYEDNEL 561
           RRPP  K   + +  PKLV+++  +W+Y  N L
Sbjct: 357 RRPPACKRAKDQESYPKLVELTLNNWDYSSNLL 389


>01_03_0303 + 14792842-14792949,14793659-14793760,14794657-14794800,
            14794906-14794986,14795078-14795147,14795267-14795337,
            14795427-14795594,14796030-14796074,14796449-14796511,
            14796594-14796869,14797858-14797971,14798099-14798225,
            14798315-14798484,14798743-14798841,14799577-14799630,
            14801487-14801522,14801741-14801844,14801952-14802186,
            14802377-14802609,14802846-14803346,14803422-14803716,
            14805796-14805881,14806952-14807064,14807303-14807385,
            14808014-14808866,14809215-14809364,14809963-14811146
          Length = 1854

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = +1

Query: 355  RELFGTYSYALFIPLPGVTADDIIVKSKYRYVYITARRPPPAKPYT 492
            ++LF +  + L + L  +T+ +++   +  Y+Y++ R P P +  T
Sbjct: 990  KDLFSSILHGLSVELNSITSSELVGLCREIYIYLSDRDPAPRQNTT 1035


>10_08_0547 -
           18682357-18682683,18682971-18683060,18683279-18683301,
           18683397-18683496,18683615-18683749
          Length = 224

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
 Frame = +1

Query: 61  GTFGAIAQCSNFYYFLTLLTIVACCHHGRSHKCRH-----ERPSKCRHGGKLGCKRGRWS 225
           GT      C    Y L  +T+   C+H    KC H        S   H G L C+   W 
Sbjct: 99  GTQDKCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQ 158

Query: 226 ERPGFKKYG 252
               FKK G
Sbjct: 159 L---FKKSG 164


>07_03_0633 + 20120560-20123464,20123608-20123672
          Length = 989

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 680 FGSYLSSLSGTVIQESL*SKPHL*RSPSFVSEFTYLK 570
           F + LS LSG  + +   S+  L ++P F+++FT+L+
Sbjct: 546 FANILSHLSGLRVLDFSYSEAKLEKAPDFINKFTHLR 582


>08_02_0957 +
           23033602-23034749,23035519-23035765,23036598-23036744,
           23036849-23037076
          Length = 589

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 188 MVVNSAAKGAGGQNAPASRNTERI*TNNS 274
           ++VNS+  GAGG ++PA+ N   +   NS
Sbjct: 169 LLVNSSESGAGGDDSPAASNDLMLYITNS 197


>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
          Length = 1412

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 646  TVPESDDKYEPNIDVRFA-LQNAEVNNKINDYFKNTTTPQPDLDTNHLDTKEQV 804
            TV E D K   N  V  A L+  +     ND+ ++ T  +PD  T   D  E+V
Sbjct: 1200 TVEEPDKKTAANDHVEDATLEEPDKKTAANDHVEDVTVEEPDKKTAANDPVEEV 1253


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,424,577
Number of Sequences: 37544
Number of extensions: 470930
Number of successful extensions: 1510
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)