Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_M09
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p...    32   0.63 
U39851-8|AAF99879.1|  937|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U53154-5|AAC25853.1|  347|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AC024800-6|AAF60726.1|  416|Caenorhabditis elegans Hypothetical ...    30   2.5  
S47168-2|AAB23866.2|  919|Caenorhabditis elegans UNC-5 protein.        29   3.3  
S47168-1|AAB23867.2|  947|Caenorhabditis elegans UNC-5 protein.        29   3.3  
AF040653-5|AAB95026.1|  491|Caenorhabditis elegans F-box b prote...    29   3.3  
AF036698-5|AAB88356.2|  567|Caenorhabditis elegans Uncoordinated...    29   3.3  
AF036698-4|AAB88355.1|  919|Caenorhabditis elegans Uncoordinated...    29   3.3  
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U53154-3|AAC25852.1|  346|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
           protein C14B9.8 protein.
          Length = 1226

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
 Frame = +1

Query: 553 NELTVRFKYVNSDTNDGDLYKCGFDYKDSWITVPESDDKYE--PNIDVRFALQNAEVNNK 726
           ++ ++R + +  D+ND DL K    YK     + + D  Y+  P       L     + +
Sbjct: 694 HKASMRHRSIALDSNDADLMKLRLAYKSRPRDLQDMDSTYQSPPPTQTPLGLVKEHSSGE 753

Query: 727 INDYFKNTTTPQPDLDTNHLD-TKEQVKQ 810
           +      TT    + +T H D T EQ+ +
Sbjct: 754 LRQQLLKTTRRGAENETTHRDLTAEQMNE 782


>U39851-8|AAF99879.1|  937|Caenorhabditis elegans Hypothetical
           protein C23G10.8 protein.
          Length = 937

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 222 VRTPRLQEIRRGYKRTTHRRPEQGPEANRRPSSQAVQRL*KRGHS 356
           + T RLQ IRR    T  R   +GP ++  PS  A     + GHS
Sbjct: 755 METHRLQSIRRSLADTAERAETEGPSSSTGPSISAPPIPSRPGHS 799


>U53154-5|AAC25853.1|  347|Caenorhabditis elegans Hypothetical
           protein C33G8.10 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = +1

Query: 67  FGAIA--QCSNF---YYFLTLLTIVACCHH--GRSHKCRHERPSKCRHGGKLGCK 210
           FG I+   C+ F   Y     L I   C H    SH CRH R  KC   G + CK
Sbjct: 15  FGGISCRACAAFFRRYVHSRKLDISCTCKHRLATSHPCRHCRMLKCMATGMVKCK 69


>AC024800-6|AAF60726.1|  416|Caenorhabditis elegans Hypothetical
           protein Y49F6A.5 protein.
          Length = 416

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +1

Query: 667 KYEPNIDVRFALQNAEVNNKINDYFKNTTTPQPDLD 774
           ++ P  ++       E+ N + D+FKNTTT + ++D
Sbjct: 167 QFPPGPEINKTWTTEEIGNFLKDHFKNTTTSKLEVD 202


>S47168-2|AAB23866.2|  919|Caenorhabditis elegans UNC-5 protein.
          Length = 919

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = +1

Query: 46  ILSSNGTFGAIAQCSNFYYFLTLLTIVACCHHGRSHKCRHERPSKCRHGGKLGCKRGRWS 225
           ++S    +G++A       F+  +  + CC  G S K +  +P K       G     +S
Sbjct: 333 VISDTAVYGSVASIFIVASFILAILAMFCCKRGNSKKSKPLKPQKMNSEKAGGI---YYS 389

Query: 226 ERPGFKK 246
           E PG ++
Sbjct: 390 EPPGVRR 396


>S47168-1|AAB23867.2|  947|Caenorhabditis elegans UNC-5 protein.
          Length = 947

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = +1

Query: 46  ILSSNGTFGAIAQCSNFYYFLTLLTIVACCHHGRSHKCRHERPSKCRHGGKLGCKRGRWS 225
           ++S    +G++A       F+  +  + CC  G S K +  +P K       G     +S
Sbjct: 361 VISDTAVYGSVASIFIVASFILAILAMFCCKRGNSKKSKPLKPQKMNSEKAGGI---YYS 417

Query: 226 ERPGFKK 246
           E PG ++
Sbjct: 418 EPPGVRR 424


>AF040653-5|AAB95026.1|  491|Caenorhabditis elegans F-box b protein
           protein 52 protein.
          Length = 491

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = -1

Query: 471 WSARGYVHISVFAFDDDIISGNSRERYEQRVTVGPEQFTSARVF---IIVAQPAKTVVDS 301
           W++R    + +FAF    +S +SR     R+   P  F +   F   + + QP+K    +
Sbjct: 62  WNSRKEHAVCMFAFGHVTLSVSSRRSRRSRLFSTPRLFDTRSWFNHLMDILQPSKLNTLN 121

Query: 300 LQVPAQVFDE 271
           ++ P+  FDE
Sbjct: 122 VENPSDEFDE 131


>AF036698-5|AAB88356.2|  567|Caenorhabditis elegans Uncoordinated
           protein 5, isoform b protein.
          Length = 567

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = +1

Query: 46  ILSSNGTFGAIAQCSNFYYFLTLLTIVACCHHGRSHKCRHERPSKCRHGGKLGCKRGRWS 225
           ++S    +G++A       F+  +  + CC  G S K +  +P K       G     +S
Sbjct: 333 VISDTAVYGSVASIFIVASFILAILAMFCCKRGNSKKSKPLKPQKMNSEKAGGI---YYS 389

Query: 226 ERPGFKK 246
           E PG ++
Sbjct: 390 EPPGVRR 396


>AF036698-4|AAB88355.1|  919|Caenorhabditis elegans Uncoordinated
           protein 5, isoform a protein.
          Length = 919

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = +1

Query: 46  ILSSNGTFGAIAQCSNFYYFLTLLTIVACCHHGRSHKCRHERPSKCRHGGKLGCKRGRWS 225
           ++S    +G++A       F+  +  + CC  G S K +  +P K       G     +S
Sbjct: 333 VISDTAVYGSVASIFIVASFILAILAMFCCKRGNSKKSKPLKPQKMNSEKAGGI---YYS 389

Query: 226 ERPGFKK 246
           E PG ++
Sbjct: 390 EPPGVRR 396


>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical protein
            C28G1.4 protein.
          Length = 1081

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
 Frame = +1

Query: 562  TVRFKYVNSDTNDGD-LYKCGF-DYKDSWITVPESDDKYEPNIDVRFALQNAEVNNKIND 735
            +V   + +SD +  + LY+C   DY D    V    +    NID    L  A V   I+ 
Sbjct: 940  SVNNSFEHSDRHGWNKLYRCKLCDYSDDTKEVVGFHETKHHNID---HLTLANVVRNISC 996

Query: 736  YFKNTTTPQPDLDTNHLDTKEQVKQKTLKILYNISHCVYMT 858
              +N    QP L+ N   T  ++ Q++   L   S C Y T
Sbjct: 997  NMRNGFI-QPSLNGNQTPTSYKIAQRSGGALIKCSFCEYHT 1036


>U53154-3|AAC25852.1|  346|Caenorhabditis elegans Hypothetical
           protein C33G8.8 protein.
          Length = 346

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
 Frame = +1

Query: 43  KILSSNGT---FG--AIAQCSNFY--YFLTLLTIVAC-CHHG--RSHKCRHERPSKCRHG 192
           K+  +NG    FG  +   C+ F+  Y  +   ++ C C H    SH CRH R  KC   
Sbjct: 4   KVCGANGAEAHFGGESCRACAAFFRRYVHSQKLVIECTCLHRLPSSHPCRHCRMEKCIAT 63

Query: 193 GKLGCK 210
           G   CK
Sbjct: 64  GMTMCK 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,314,549
Number of Sequences: 27780
Number of extensions: 419199
Number of successful extensions: 1320
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)