Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_M08
         (1132 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     34   0.24 
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063...    30   2.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   9.0  

>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = +3

Query: 777 PRPXYXPXNXPXSNTPXXXXPGPGXXHXNXPXRXGXXPIWXPGPXPPXXXXPFPVLPXXL 956
           P+P   P        P    P PG      P + G  P   PGP  P    PFP  P   
Sbjct: 181 PKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKP--KPGPPQPWWPIPFPKPPCPP 238

Query: 957 GA 962
           GA
Sbjct: 239 GA 240


>08_02_0672 -
           19904353-19904839,19905646-19905704,19906137-19906352,
           19906845-19907422,19907506-19908180,19908263-19908653,
           19909469-19909621,19909727-19909980,19911023-19911479
          Length = 1089

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 39/155 (25%), Positives = 45/155 (29%), Gaps = 5/155 (3%)
 Frame = +3

Query: 513 LNPGXGPCPTXPXPHLAXEXSXXXXXLEPXVXFGPLVRP--XH*XXKXAXGTXERRXPXX 686
           L P   P PT P P +    S       P   F P  RP               +  P  
Sbjct: 46  LTPNPNPSPTLPPPPM----STPPVVAPPMHSFAPSFRPLGAPPPPPPPQQVQVQVPPQY 101

Query: 687 GXVXGPALXPTARXAXSAGXELXXRXXXXRPRPXYXPXNXPXSNTPXXXXPGPGXXHXNX 866
           G V  P   P A+     G          RP   Y P        P    P PG      
Sbjct: 102 GGVPNPG-YPMAQQMQPPGVPHVMPPGAVRPPAMYAPQPGVYLQQPGAALP-PGMPRYPG 159

Query: 867 PXRXGXXPIWXPGPXPPXXXXPF---PVLPXXLGA 962
           P      P + P P PP    P    P++P   GA
Sbjct: 160 PYPM-MRPGFPPRPMPPVGVMPLQRPPIIPGIRGA 193


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 16/57 (28%), Positives = 19/57 (33%)
 Frame = +3

Query: 777 PRPXYXPXNXPXSNTPXXXXPGPGXXHXNXPXRXGXXPIWXPGPXPPXXXXPFPVLP 947
           P P   P   P S +P    P PG    + P       +  P P PP    P    P
Sbjct: 271 PSPAPAPAARPASPSPSLPLP-PGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAP 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,954,988
Number of Sequences: 37544
Number of extensions: 219130
Number of successful extensions: 445
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3421418428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)