Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_M07
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M98776-1|AAB47721.1| 644|Homo sapiens keratin 1 protein. 31 3.0
BC063697-1|AAH63697.1| 644|Homo sapiens keratin 1 (epidermolyti... 31 3.0
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 31 3.0
AF304164-1|AAG41947.1| 644|Homo sapiens keratin 1 protein. 31 3.0
AF237621-1|AAF60327.1| 644|Homo sapiens keratin 1 protein. 31 3.0
BC027713-1|AAH27713.1| 804|Homo sapiens heterogeneous nuclear r... 30 6.9
BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein. 30 6.9
BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein. 30 6.9
BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear r... 30 6.9
AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens ... 30 6.9
AK021455-1|BAB13831.1| 390|Homo sapiens protein ( Homo sapiens ... 30 6.9
AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated pr... 30 6.9
M99061-1|AAC83410.1| 645|Homo sapiens epidermal cytokeratin 2 p... 30 9.1
BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 9.1
BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 9.1
BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 9.1
AF019084-1|AAB81946.1| 645|Homo sapiens keratin 2e protein. 30 9.1
>M98776-1|AAB47721.1| 644|Homo sapiens keratin 1 protein.
Length = 644
Score = 31.5 bits (68), Expect = 3.0
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 436 GGGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKKXKXXGGXXNXG 585
GGG GG GG G G G GGGG + GG + G
Sbjct: 562 GGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGG 611
>BC063697-1|AAH63697.1| 644|Homo sapiens keratin 1 (epidermolytic
hyperkeratosis) protein.
Length = 644
Score = 31.5 bits (68), Expect = 3.0
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 436 GGGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKKXKXXGGXXNXG 585
GGG GG GG G G G GGGG + GG + G
Sbjct: 562 GGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGG 611
>AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA
sequence from clone RP11-223F20 on chromosome 13
Contains a novel heterogeneous nuclear ribonucleoprotein
family A protein and).
Length = 276
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 436 GGGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGG 543
G G+ + GG GGGG G+ + G GGGG
Sbjct: 190 GTGYGNQGGGYGGGGGGYDGYNEGGNFGGGNYGGGG 225
>AF304164-1|AAG41947.1| 644|Homo sapiens keratin 1 protein.
Length = 644
Score = 31.5 bits (68), Expect = 3.0
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 436 GGGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKKXKXXGGXXNXG 585
GGG GG GG G G G GGGG + GG + G
Sbjct: 562 GGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGG 611
>AF237621-1|AAF60327.1| 644|Homo sapiens keratin 1 protein.
Length = 644
Score = 31.5 bits (68), Expect = 3.0
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 436 GGGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKKXKXXGGXXNXG 585
GGG GG GG G G G GGGG + GG + G
Sbjct: 562 GGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGG 611
>BC027713-1|AAH27713.1| 804|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 804
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 439 GGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKK 552
GGF + GG GGGG GF + G + G +
Sbjct: 640 GGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNR 677
>BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 439 GGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKK 552
GGF + GG GGGG GF + G + G +
Sbjct: 540 GGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNR 577
>BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 439 GGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKK 552
GGF + GG GGGG GF + G + G +
Sbjct: 540 GGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNR 577
>BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 856
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 439 GGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKK 552
GGF + GG GGGG GF + G + G +
Sbjct: 640 GGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNR 677
>AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens
cDNA FLJ45114 fis, clone BRAWH3034775, highly similar
to Homo sapiens E1B-55kDa-associated protein 5
(E1B-AP5). ).
Length = 752
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 439 GGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKK 552
GGF + GG GGGG GF + G + G +
Sbjct: 526 GGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNR 563
>AK021455-1|BAB13831.1| 390|Homo sapiens protein ( Homo sapiens
cDNA FLJ11393 fis, clone HEMBA1000591, weakly similar to
PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 390
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 439 GGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKK 552
GGF + GG GGGG GF + G + G +
Sbjct: 164 GGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNR 201
>AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated
protein protein.
Length = 856
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 439 GGF*KKXGGXGGGGXKXXGFKKXGXXXFPXXGGGGKKK 552
GGF + GG GGGG GF + G + G +
Sbjct: 640 GGFQNRGGGSGGGGNYRGGFNRNGGGGYSQNRWGNNNR 677
>M99061-1|AAC83410.1| 645|Homo sapiens epidermal cytokeratin 2
protein.
Length = 645
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 400 GGXXKXXXKKXLGGGF*KKXGGXGGGGX-KXXGFKKXGXXXFPXXGGGGKKKXKXXGGXX 576
GG GG GG GGGG G+ G GGG K GG
Sbjct: 536 GGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGY 595
Query: 577 NXGG 588
GG
Sbjct: 596 GSGG 599
>BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 400 GGXXKXXXKKXLGGGF*KKXGGXGGGGX-KXXGFKKXGXXXFPXXGGGGKKKXKXXGGXX 576
GG GG GG GGGG G+ G GGG K GG
Sbjct: 530 GGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGY 589
Query: 577 NXGG 588
GG
Sbjct: 590 GSGG 593
>BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 400 GGXXKXXXKKXLGGGF*KKXGGXGGGGX-KXXGFKKXGXXXFPXXGGGGKKKXKXXGGXX 576
GG GG GG GGGG G+ G GGG K GG
Sbjct: 530 GGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGY 589
Query: 577 NXGG 588
GG
Sbjct: 590 GSGG 593
>BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 400 GGXXKXXXKKXLGGGF*KKXGGXGGGGX-KXXGFKKXGXXXFPXXGGGGKKKXKXXGGXX 576
GG GG GG GGGG G+ G GGG K GG
Sbjct: 530 GGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGY 589
Query: 577 NXGG 588
GG
Sbjct: 590 GSGG 593
>AF019084-1|AAB81946.1| 645|Homo sapiens keratin 2e protein.
Length = 645
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 400 GGXXKXXXKKXLGGGF*KKXGGXGGGGX-KXXGFKKXGXXXFPXXGGGGKKKXKXXGGXX 576
GG GG GG GGGG G+ G GGG K GG
Sbjct: 536 GGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGY 595
Query: 577 NXGG 588
GG
Sbjct: 596 GSGG 599
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,433,132
Number of Sequences: 237096
Number of extensions: 922281
Number of successful extensions: 1829
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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