Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_L23
         (938 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   142   5e-34
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   137   1e-32
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   134   1e-31
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   132   4e-31

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  142 bits (343), Expect = 5e-34
 Identities = 69/136 (50%), Positives = 88/136 (64%)
 Frame = +2

Query: 185 LLVXPDGVQRGLVGTIXERFEKKGFKLVGLKFVWPSEELLXQHYSDLASRPFFPGLXKYM 364
           + + PDGVQRGL+  I  RFE+KGFKLV +K V PS+E   +HY DL  RPFF GL  ++
Sbjct: 50  IAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPFFNGLCDFL 109

Query: 365 SSGPVVPMVWEGLNVVKTGRHIAXAQLTQLTXXPALSAVISAFXLGRNIIHGSDSVESAX 544
           SSGPV+ MVWEG  V+K GR +  A   Q +    +   + A  +GRNIIHGSD  E+A 
Sbjct: 110 SSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDL-AVVVGRNIIHGSDGPETAK 168

Query: 545 XXIGLWFTDXEVVGWT 592
             IGLWF   E+V +T
Sbjct: 169 AEIGLWFEPRELVSYT 184


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  137 bits (332), Expect = 1e-32
 Identities = 66/129 (51%), Positives = 83/129 (64%)
 Frame = +2

Query: 185 LLVXPDGVQRGLVGTIXERFEKKGFKLVGLKFVWPSEELLXQHYSDLASRPFFPGLXKYM 364
           +++ PDGVQRGL+G I  RFEKKGF L G+KF+        QHY+DL+ +PFFPGL +Y+
Sbjct: 6   IMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYI 65

Query: 365 SSGPVVPMVWEGLNVVKTGRHIAXAQLTQLTXXPALSAVISAFXLGRNIIHGSDSVESAX 544
            SGPVV MVWEG +VV TGR I  A        P       A  +GRN+IHGSDSV++  
Sbjct: 66  ISGPVVAMVWEGKDVVATGRRIIGA-TRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGK 124

Query: 545 XXIGLWFTD 571
             I LWF +
Sbjct: 125 KEIALWFPE 133


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  134 bits (323), Expect = 1e-31
 Identities = 64/129 (49%), Positives = 83/129 (64%)
 Frame = +2

Query: 185 LLVXPDGVQRGLVGTIXERFEKKGFKLVGLKFVWPSEELLXQHYSDLASRPFFPGLXKYM 364
           +++ PDGVQRGL+G +  RFEKKGF L  +K +   +    +HY+DL+S+PFF GL +Y+
Sbjct: 8   IMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGLVEYI 67

Query: 365 SSGPVVPMVWEGLNVVKTGRHIAXAQLTQLTXXPALSAVISAFXLGRNIIHGSDSVESAX 544
            SGPVV MVWEG  VV TGR +  A    L   P       A  +GRN+IHGSDSVE+A 
Sbjct: 68  VSGPVVAMVWEGKQVVSTGRKLVGA-TNPLAAEPGTIRGDFAVDIGRNVIHGSDSVENAR 126

Query: 545 XXIGLWFTD 571
             I LWF +
Sbjct: 127 KEIALWFPE 135


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  132 bits (319), Expect = 4e-31
 Identities = 64/135 (47%), Positives = 82/135 (60%)
 Frame = +2

Query: 185 LLVXPDGVQRGLVGTIXERFEKKGFKLVGLKFVWPSEELLXQHYSDLASRPFFPGLXKYM 364
           +++ PDGVQRGLVG I  RFEKKGF L GLK     ++L  +HY DL  +PFFPGL +Y+
Sbjct: 7   IMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGLIEYI 66

Query: 365 SSGPVVPMVWEGLNVVKTGRHIAXAQLTQLTXXPALSAVISAFXLGRNIIHGSDSVESAX 544
           +SGPVV M WEG  VV + R +  A    L   P       A   GRN++HGSDS ++  
Sbjct: 67  TSGPVVCMAWEGNGVVASARKLIGA-TNPLQAEPGTIRGDLAVQTGRNVVHGSDSPDNGK 125

Query: 545 XXIGLWFTDXEVVGW 589
             I LWF + E+  W
Sbjct: 126 REIALWFKEGELCEW 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,068,748
Number of Sequences: 37544
Number of extensions: 263235
Number of successful extensions: 471
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)