Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_L17
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0085 + 26289952-26290333,26290439-26290551,26291284-26291865     32   0.53 
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    29   3.8  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.8  

>01_06_0085 + 26289952-26290333,26290439-26290551,26291284-26291865
          Length = 358

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 405 NRSLNSAMASSLIFS*KIENSKFLGRNPTLYIIMKFS*AFMFV*QSLL-ASMLKSWA 238
           NR   S  A S +FS K   S+    NP LY+I KF  A   V  SL  A M+KSW+
Sbjct: 53  NRERRSRYAGSCLFSRKDFLSRVDVSNPNLYVITKFIYAMCTV--SLPDAFMIKSWS 107


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 624 DEKICYNYGIIKENEQFVM-YANYSNSLDL 710
           DE +C+ YG ++ENE +++ + +  N L+L
Sbjct: 459 DEVLCWLYGTVRENEDYILQFVHPFNRLEL 488


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 262  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 360
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,553,440
Number of Sequences: 37544
Number of extensions: 420553
Number of successful extensions: 973
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)