Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_L14
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family...    29   5.8  

>U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical
           protein F55F8.7 protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = -2

Query: 419 KKMNSNEKNHPLLNKESLKSVDLQKSSKVTNIKKKVELRNSSFFLSRLKKYTEFNKE 249
           KK+NS E+      K     +D++K+    + KKKV+ ++ S  LS+ KK  E  KE
Sbjct: 78  KKLNSKEEVKKEKKKSEDDLLDVKKTVSKEDDKKKVDKKDGSKKLSK-KKLKEEKKE 133


>U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family
           protein 4 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 192 HDQRCSRAQVEDLQENCKWFFIEFC 266
           ++   SR  +EDL+E C  FF E C
Sbjct: 67  YEDMYSRKLLEDLEEECGGFFFEMC 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,709,559
Number of Sequences: 27780
Number of extensions: 254446
Number of successful extensions: 519
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)