Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_L13
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0161 + 21400580-21401695                                         30   2.9  
07_01_0479 + 3606663-3607448                                           28   8.8  

>03_05_0161 + 21400580-21401695
          Length = 371

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 798 SPRAPXXAXXPKKGRVGGGFTXXAPPP 878
           +P A   A  P+KG  GGG T   PPP
Sbjct: 2   APAAGDDAVVPRKGAGGGGTTTPPPPP 28


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = -2

Query: 888 SFPRGGGPXX*NPPXPGPF*GXGPXXGPXXKKXFSXGVPP 769
           +FP  GGP    PP PGPF    P  GP   +    G PP
Sbjct: 196 AFP--GGP----PPPPGPFMRGPPPMGPPQVRPGMPGGPP 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,319,766
Number of Sequences: 37544
Number of extensions: 183274
Number of successful extensions: 245
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)