BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_L12
(905 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 27 0.31
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 26 0.54
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.9
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 22 6.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 6.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.7
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 26.6 bits (56), Expect = 0.31
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 198 LIPVHVSYLARP-VSLVIVQHTVTPFCRTDAGCEELVRNIQTNHMEALQYWDIGPSFLVG 374
++ + V Y++ P +S+ TP R A E+ + N + Q P+FL
Sbjct: 181 ILAIKVYYISCPEISVNFAHFPATPTGREVALIEQTIGTCVANAVVIEQ-----PTFLCK 235
Query: 375 GNGKVYEGSGWLH 413
G+GK Y SG H
Sbjct: 236 GDGKWYLPSGGCH 248
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 25.8 bits (54), Expect = 0.54
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Frame = -1
Query: 584 SVRHGAVVPREVAALHAAAQQRPQ-RLQHRAA--------RLVRVEVA---DECDSDGPR 441
+VR G V RE A + AA QQ R Q +A RL+ V D CD +
Sbjct: 137 AVRFGRVPKREKARILAAMQQSSHSRSQEKAVAAELEDEQRLLATVVQAHLDTCDFTRDK 196
Query: 440 VVPVGVRADVQP 405
V P+ VRA P
Sbjct: 197 VAPILVRARETP 208
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -2
Query: 205 GIK--PSHCFLLTTSQSAAISVRSELRASASTTAEWRRAMSRSG 80
G+K P HC + A I++++ + +S S WR +G
Sbjct: 1165 GVKSAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNG 1208
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 388 TLPLPPTRNEGPMSQY 341
T+P+P N+G ++QY
Sbjct: 55 TIPVPQAANKGMINQY 70
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 6.7
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 158 CYFCEKRAESEREYNC 111
C C++R E + Y+C
Sbjct: 274 CSLCQRRFEEQGNYSC 289
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 47 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 85
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 280 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 318
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 146 EKRAESEREYNCRVEAGHVEERRVPARQHAGMPKILRNS 30
+K +++REY E R R+ + PKI+ N+
Sbjct: 280 QKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNN 318
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,503
Number of Sequences: 438
Number of extensions: 4932
Number of successful extensions: 41
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -