Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_L07
(875 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase |Schizosaccharom... 36 0.010
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 33 0.040
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 33 0.071
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 31 0.22
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 29 1.1
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 29 1.1
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 28 1.5
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 27 2.7
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual 27 2.7
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 26 6.1
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 26 6.1
SPCC1183.03c |||frataxin homolog|Schizosaccharomyces pombe|chr 3... 26 6.1
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 26 6.1
SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.1
SPBC19F8.08 |rps401|rps4-1, rps4, SPBC25H2.17c|40S ribosomal pro... 26 8.1
SPAC1B3.02c |||transcription elongation factor, Elf1 family|Schi... 26 8.1
SPBC21B10.10 |rps402|rps4-2|40S ribosomal protein S4|Schizosacch... 26 8.1
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 26 8.1
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 26 8.1
SPAC959.07 |rps403|rps4-3, rps4|40S ribosomal protein S4|Schizos... 26 8.1
>SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 35.5 bits (78), Expect = 0.010
Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 22/192 (11%)
Frame = +1
Query: 121 VITGAAGFLGSRLADALLKPNSEL---CVTELVLVD----TILPPSRKDPRVITLALNIT 279
+ITG AGF+GS D + + C+ +L V L P L +++
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLA 72
Query: 280 TPEAARKLVDTDTDVLFHLAAVVSGHAEEDFDLGM-------KVNFNATRSLLEAAR--- 429
T + + + +++ AE D K N +T++LLE R
Sbjct: 73 TNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILL 132
Query: 430 ----HRATKLRFVFTSTVGVFG-GDLPPIITDQTAATPQNSYGIAKAMSELLINDYSRRG 594
+L FV ST V+G D + +++ P + Y +KA +L+I Y
Sbjct: 133 GKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNPTSPYAASKAAVDLIIQSYRYSY 192
Query: 595 FVDGRVVRLPTV 630
+ V+R V
Sbjct: 193 KISVTVIRANNV 204
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 33.5 bits (73), Expect = 0.040
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Frame = +1
Query: 118 VVITGAAGFLGSRLADALLKPNSEL--CVTELVLVDTI--LPPSRKDPRVITLALNITTP 285
V++TG GF+G+ +A+ LL+ + V + D + L P KD + +++
Sbjct: 6 VLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADELIRLNPGLKDKIEFVIVKDVSAS 65
Query: 286 EAARKLVDTDTDVLFHLAA--VVSGHAEEDFDLGMKVNFNATRSLLEAARHRATKLRFVF 459
A ++ D +++ H+A+ V + L + T +LEAA+ + R V
Sbjct: 66 NAFDGVL-KDVELICHIASPFFVENVTDNKSQL-LDPAVKGTLGILEAAQGVKSIKRIVI 123
Query: 460 TSTVGVFG 483
TS+ G
Sbjct: 124 TSSFAAVG 131
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 32.7 bits (71), Expect = 0.071
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 10/167 (5%)
Frame = +1
Query: 118 VVITGAAGFLGSRLADALLKPNSELCVTELVLVDTILPPSRKD----PRVITLALNITTP 285
V++TG AG++GS LL+ ++ + + + + R + +VI +++
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTGKKVIFHQVDLLDE 68
Query: 286 EAARKL-VDTDTDVLFHLAAVVSGHAEEDFDLG-MKVNFNATRSLLEAARHRATKLRFVF 459
A K+ + + + H A + + L K N + T +L+E + + FVF
Sbjct: 69 PALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVR-DFVF 127
Query: 460 TSTVGVFGGDLPP----IITDQTAATPQNSYGIAKAMSELLINDYSR 588
+S+ V+G P I + + YG K E +I D ++
Sbjct: 128 SSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETK 174
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 112 MKVVITGAAGFLGSRLADALLKPNSEL 192
M++ +TGAAGF+GS + LL+ E+
Sbjct: 1 MRIFVTGAAGFIGSEIVRQLLEAGHEV 27
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 28.7 bits (61), Expect = 1.1
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 12/166 (7%)
Frame = +1
Query: 118 VVITGAAGFLGSRLADALLKPNSELCVTELVLVDTILPPSRKD----PRVITLALNITTP 285
+++TG AG++GS L+ ++ + + + +R + + L++
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRDK 67
Query: 286 EAARKLVDT-DTDVLFHLAAVVSGHAEEDFDLGMKV---NFNATRSLLEAARHRATKLRF 453
E ++ DT + H AA+ + E L ++ N T +LL R K
Sbjct: 68 EGLAQIFDTFKIKGVIHFAALKA--VGESMKLPLEYYDNNICGTITLLNVMREHRVK-TV 124
Query: 454 VFTSTVGVFGG----DLPPIITDQTAATPQNSYGIAKAMSELLIND 579
VF+S+ V+G D I + P N YG K E +I D
Sbjct: 125 VFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKD 170
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 357 MSTYDCSQMKQYIGISINEFTRSLWCCDIEGECYYSWIFS 238
MS +M YI +SI + ++ D+ GEC SW+++
Sbjct: 457 MSLSSTKRMASYIKLSILK-KMVVYAMDLRGECMLSWLYN 495
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 148 GSRLADALLKPNSELCVTEL--VLVDTILPPSRKDPRVITLALNITTPEAARKLVDTDTD 321
G+ + +K SEL T + + V+ +P ++ + L + +T E KLV D
Sbjct: 728 GATYVEIRVKATSELESTNMLWISVNQTIPQTKLNEASTELIMPVTQNEVTTKLVSIDDS 787
Query: 322 VLFHLAAVVSGHAEEDFDLGMKVNFNATR 408
L + E L + VNF+ +
Sbjct: 788 YTLELCMAQWWSSLEPMVLDIDVNFHGIK 816
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 204 FSHTQFGIWF*QSIS*TRTQKASSSCYDHFHF 109
F QF W+ SIS R+ +AS S + +FHF
Sbjct: 304 FWEEQFSSWYGPSISFLRSSQASQSLF-NFHF 334
>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 27.5 bits (58), Expect = 2.7
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 685 IREPLNGEVAICPVPPDQELWLSSPGSVVYNLIHAATLLSSELEKWRVINLPGISVTVRK 864
IREP V P P Q LWL + S N+I ++L L +W I +VT +K
Sbjct: 327 IREPTIHFVLYVPSPQIQPLWLENEDS---NIIPTNSML---LPQWGSITTINFNVTEKK 380
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 429 TSSYEASFCFYQYCW 473
T+S E C+Y YCW
Sbjct: 574 TASPECQQCYYNYCW 588
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 393 IHFHSKIEVFFSMSTYDCSQMKQYIGISINEFTRSLW 283
++F KI+ FF MST ++ IG+S N T+SL+
Sbjct: 194 LYFDVKIDTFFWMST--DGRVYANIGVSSNTNTKSLF 228
>SPCC1183.03c |||frataxin homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 158
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 670 FASGIIREPLN--GEVAICPVPPDQELWLSSPGS 765
+A+G+I L G I PP ++WLSSP S
Sbjct: 78 YANGVITLMLGEKGTYVINKQPPAHQIWLSSPVS 111
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 661 VTSFASGIIREPLNGEVAICPVPPD 735
V + +I EP+ GE ICP P+
Sbjct: 220 VNDKTAAVIVEPVQGEGGICPAKPE 244
>SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 457 FTSTVGVFGGDLPPIITDQTAATPQNS 537
FT++ F DLP +TDQ A P S
Sbjct: 125 FTNSQKYFANDLPNSLTDQPLAQPSAS 151
>SPBC19F8.08 |rps401|rps4-1, rps4, SPBC25H2.17c|40S ribosomal
protein S4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 875 TGNHLRTVTLIPGRFITLHFSNSELSKVAAC 783
TG H R V I GRF T+H +E +K C
Sbjct: 95 TGEHFRLVYDIKGRF-TVHRITAEEAKYKLC 124
>SPAC1B3.02c |||transcription elongation factor, Elf1
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 107
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 179 GFSKASAKREPKKPAAPVMTTF 114
G KA AK +PK+ A P+ TTF
Sbjct: 2 GKRKAKAKVKPKRRAPPLDTTF 23
>SPBC21B10.10 |rps402|rps4-2|40S ribosomal protein
S4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 875 TGNHLRTVTLIPGRFITLHFSNSELSKVAAC 783
TG H R V I GRF T+H +E +K C
Sbjct: 95 TGEHFRLVYDIKGRF-TVHRITAEEAKYKLC 124
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 458 LPVLLGCSEVTCPLL*LIKLPQ 523
LPV LG +E PLL L++LP+
Sbjct: 11 LPVALGGNEEESPLLMLVQLPK 32
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 25.8 bits (54), Expect = 8.1
Identities = 19/88 (21%), Positives = 33/88 (37%)
Frame = +1
Query: 61 HLRYXRRFSWKLSANSKMKVVITGAAGFLGSRLADALLKPNSELCVTELVLVDTILPPSR 240
H+ +F S + + +++G L S DA L + + + T+LP
Sbjct: 219 HVNRGTQFKRSSSCRNSRQPLLSGVDKHLTSNFTDANLIIKQSVVLARIESTFTVLPSDY 278
Query: 241 KDPRVITLALNITTPEAARKLVDTDTDV 324
D + +P + LV TDV
Sbjct: 279 NDSAAQRVPRKTISPWSQCLLVARQTDV 306
>SPAC959.07 |rps403|rps4-3, rps4|40S ribosomal protein
S4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 875 TGNHLRTVTLIPGRFITLHFSNSELSKVAAC 783
TG H R V I GRF T+H +E +K C
Sbjct: 95 TGEHFRLVYDIKGRF-TVHRITAEEAKYKLC 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,331,658
Number of Sequences: 5004
Number of extensions: 66780
Number of successful extensions: 211
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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