Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_L07
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64847-1|AAN84827.1| 358|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AL032655-6|CAA21722.1| 462|Caenorhabditis elegans Hypothetical ... 46 5e-05
Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical p... 36 0.038
Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical p... 36 0.050
U40939-5|AAA81703.3| 343|Caenorhabditis elegans Hypothetical pr... 32 0.47
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 32 0.62
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 31 1.1
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 31 1.1
U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z30662-1|CAA83137.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical... 28 7.6
AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical ... 28 7.6
>U64847-1|AAN84827.1| 358|Caenorhabditis elegans Hypothetical
protein F08F3.4 protein.
Length = 358
Score = 76.2 bits (179), Expect = 3e-14
Identities = 71/262 (27%), Positives = 111/262 (42%), Gaps = 3/262 (1%)
Frame = +1
Query: 79 RFSWKLSANSKMKVVITGAAGFLGSRLADALLKPNSELCVTELVLVDTI-LPPSRKDPRV 255
RF +V+ITG+ G LG L CV V+ D + LP + D
Sbjct: 27 RFKTISQTQKAPRVLITGSLGQLGRGLNSVYKYMYGSECV---VMSDIVRLPANATDVSD 83
Query: 256 ITLALNITTPEAARKLVDTDTDVLFHLAAVVSGHAEEDFDLGMKVNFNATRSLLE-AARH 432
+ +V+ + D + H +A++S E + L ++VN ++L+ AA+H
Sbjct: 84 YNYLDILNQGSIEEIVVNKNIDTIVHFSALLSAVGETNVPLALQVNCRGVENILQVAAKH 143
Query: 433 RATKLRFVFTSTVGVFGGDLPPIIT-DQTAATPQNSYGIAKAMSELLINDYSRRGFVDGR 609
KL+ ST+G FG P T D T P YG++K +E L ++ R VD R
Sbjct: 144 ---KLKVFIPSTIGAFGPTTPRENTPDLTVQCPTTIYGVSKVYAERLGEYFNHRFGVDFR 200
Query: 610 VVRLPTVSIRAGTANRAVTSFASGIIREPLNGEVAICPVPPDQELWLSSPGSVVYNLIHA 789
+R P + I A T +A I + L C + PD L + + ++I
Sbjct: 201 SMRFPGI-ISATKPGGGTTDYAIQIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQL 259
Query: 790 ATLLSSELEKWRVINLPGISVT 855
S L++ R N+ G S T
Sbjct: 260 LAADSQSLKR-RTYNVTGFSFT 280
>AL032655-6|CAA21722.1| 462|Caenorhabditis elegans Hypothetical
protein Y6B3B.11 protein.
Length = 462
Score = 45.6 bits (103), Expect = 5e-05
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +1
Query: 202 ELVLVDTILPPSRKDPRVITLALNITTPEAARKLVDTDTDVLFHLAAV-VSGHAEEDFDL 378
++VLVD + P R + E K D ++HLAAV ++G D
Sbjct: 105 QIVLVDVLEPRGRVLKHHVAFVKCSFDDECTMKTALEQVDTVYHLAAVGMTGQYARDRKA 164
Query: 379 GMKVNFNATRSLLEAARHRATKLRFVFTSTVGVFGGDLPPIITDQTAATPQ---NSYGIA 549
M +N T +LL AR+ + RF++TS+VGV P + P N Y +
Sbjct: 165 CMDINAVGTMNLLIWARNSGVQ-RFIYTSSVGVVFSGEPMYNATEEVGYPDDFYNYYCES 223
Query: 550 KAMSELLINDYS 585
KA +E ++ S
Sbjct: 224 KAHAERIVQKAS 235
>Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical
protein C47B2.6b protein.
Length = 349
Score = 35.9 bits (79), Expect = 0.038
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Frame = +1
Query: 112 MKVVITGAAGFLGSRLADALLKPN-SELCVTELVLVDTILPPSRKD---PRVITLA---- 267
M +++TGAAGF+GS LL + LC+ ++ RV L
Sbjct: 1 MHILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDV 60
Query: 268 --LNITT-PEAARKLVDTDT--DVLFHLAAVVS-GHAEEDFDLGMKVNFNATRSLLEAAR 429
N+ EAA + V ++ D + HLAA+ + G + N A+ +L++
Sbjct: 61 PFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCL 120
Query: 430 HRATKLRFVFTSTVGVFG--GDLPPIITDQTAATPQNSYGIAKAMSELLINDYSR 588
K FVF+S+ V+G +LP QT N YG K M E ++ D +
Sbjct: 121 KYNVK-NFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGK 174
>Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical
protein C47B2.6a protein.
Length = 347
Score = 35.5 bits (78), Expect = 0.050
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Frame = +1
Query: 112 MKVVITGAAGFLGSRLADALLKPN-SELCVTELV-LVDTILPPSRKDPRVITLA------ 267
M +++TGAAGF+GS LL + LC+ + + RV L
Sbjct: 1 MHILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISDEHGNAISLKRVAQLTGKDVPF 60
Query: 268 LNITT-PEAARKLVDTDT--DVLFHLAAVVS-GHAEEDFDLGMKVNFNATRSLLEAARHR 435
N+ EAA + V ++ D + HLAA+ + G + N A+ +L++
Sbjct: 61 QNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKY 120
Query: 436 ATKLRFVFTSTVGVFG--GDLPPIITDQTAATPQNSYGIAKAMSELLINDYSR 588
K FVF+S+ V+G +LP QT N YG K M E ++ D +
Sbjct: 121 NVK-NFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGK 172
>U40939-5|AAA81703.3| 343|Caenorhabditis elegans Hypothetical
protein F13D11.4 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.47
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 103 NSKMKVVITGAAGFLGSRLADALLK 177
N++ KV++TGA+GF+G+ + LLK
Sbjct: 3 NNETKVLVTGASGFIGTHCVEILLK 27
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 31.9 bits (69), Expect = 0.62
Identities = 41/167 (24%), Positives = 62/167 (37%), Gaps = 12/167 (7%)
Frame = +1
Query: 118 VVITGAAGFLGSRLADAL--LKPNSELC-VTELVL---VDTILPPSRKDPRVITLALNIT 279
VVITG GF+GS + + P + +L+L + R PR + +I
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67
Query: 280 TPEAARKLVD-TDTDVLFHLAA-VVSGHAEEDFDLGMKVNFNATRSLLEAARHRATKLRF 453
A + + + D + H AA S + ++ N + LE R RF
Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRF 127
Query: 454 VFTSTVGVFG-GDLPPI---ITDQTAATPQNSYGIAKAMSELLINDY 582
V ST V+G DL + + P N Y K E + Y
Sbjct: 128 VHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAY 174
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 106 SKMKVVITGAAGFLGSRLADALLKPNSEL 192
++ +++ITG AGF+GS L D L+ E+
Sbjct: 135 TRKRILITGGAGFVGSHLVDKLMLDGHEV 163
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 106 SKMKVVITGAAGFLGSRLADALLKPNSEL 192
++ +++ITG AGF+GS L D L+ E+
Sbjct: 135 TRKRILITGGAGFVGSHLVDKLMLDGHEV 163
>U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical
protein F25F8.1 protein.
Length = 630
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = -3
Query: 726 NGADSYFTIQWLPD--NSACKRCHGSVGSSGANTNCWKTN---NSPINETSSRVIIDKKL 562
N +D + W D ++ CK+CH G S +N WK S + R ++
Sbjct: 26 NSSDHIVELWWCRDCISTVCKQCHLLKGHSEHRSNEWKEQEVLRSCVQSLEGRCSRRSEV 85
Query: 561 AHSLSNAVRVL 529
AH AV+ L
Sbjct: 86 AHQQKVAVKQL 96
>Z30662-1|CAA83137.1| 344|Caenorhabditis elegans Hypothetical
protein T16H12.1 protein.
Length = 344
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/97 (24%), Positives = 45/97 (46%)
Frame = +1
Query: 403 TRSLLEAARHRATKLRFVFTSTVGVFGGDLPPIITDQTAATPQNSYGIAKAMSELLINDY 582
TRS+++ + R ++L VFT T G P +T ++ +++ + +S L I+
Sbjct: 126 TRSIIKGVKSRLSRLLSVFTGTSRCPG---PTFLTGNLVSSGLSTFTMDSEVS-LTIHSE 181
Query: 583 SRRGFVDGRVVRLPTVSIRAGTANRAVTSFASGIIRE 693
SR ++ L +V++ T RA+ RE
Sbjct: 182 SRERCRHQNILSLQSVTLHFRTRKRALFDSVINSTRE 218
>AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical
protein C17H12.9 protein.
Length = 459
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 337 AAVVSGHAEEDFDLGMKVNFNATRSLLEAARHRATKLRFVFTSTV 471
AA++ GH EEDFD G ++N + A R + + +F V
Sbjct: 209 AALMHGHCEEDFDDGEELNTKELALQIAAELKRYSIPQAIFAERV 253
>AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical
protein C09D4.4c protein.
Length = 916
Score = 28.3 bits (60), Expect = 7.6
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +1
Query: 169 LLKPNSELCVTELVLVDTILPPSRKD-----PRVITLALNITTPEAARKLVDTDTDVLFH 333
L +P EL+ +D PP + R++ + L+ T AA + + D+ L
Sbjct: 106 LCEPQKLEIEIELLYMDRYHPPQYESFVKITKRIVEIPLDPTRLVAAARSLYFDSTYLS- 164
Query: 334 LAAVVSGHAEEDFDLGMKVNFNATRSLLEAARHRATKLRFVFTST 468
A +S + + NA+ SLL+A+ ++TKLR V+ S+
Sbjct: 165 -AITMSVFSSLVMVATRQRKANASESLLQASSTKSTKLRRVYNSS 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,520,910
Number of Sequences: 27780
Number of extensions: 376917
Number of successful extensions: 1211
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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