Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_L07
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    26   0.40 
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    24   1.6  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   4.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.5  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 579 IIDKKLAHSLSNAVRVLRCCGSLISYNRGQVTSE 478
           +I +K+AH+L + ++V+ C G  +       T E
Sbjct: 107 LIAEKVAHALESGLKVIACIGEKLEEREAGKTDE 140


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -3

Query: 342 CSQMKQYIGISINEFTRSLWCCDIEGE 262
           CS   Q  G  I +  RS  CC   GE
Sbjct: 57  CSSYLQVSGSKIWQMERSCMCCQESGE 83


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 199 TELVLVDTILPPSRKDPRVITLAL 270
           T +  +D ILPPSR   + + L L
Sbjct: 227 TLIEALDAILPPSRPTDKALRLPL 250


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 369 LRSWNESEFQRNEIIAGGSET 431
           +R++NESE +RN  + G +ET
Sbjct: 366 IRNFNESENRRNSCL-GSTET 385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,935
Number of Sequences: 438
Number of extensions: 4475
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)