Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_L06
         (1099 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   8.6  
06_03_0905 + 25843547-25844314                                         29   8.6  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
 Frame = +1

Query: 811  PPXPXXXPXTXXPPLXXHPLRXPPDLXFP-XXWEPTHXXXEPXSLXXPPXLRPXXXTGPX 987
            P  P   P T  PP    P   PP    P     P      P  +  PP   P   + P 
Sbjct: 1159 PLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSPS 1218

Query: 988  XQGTQP 1005
              G QP
Sbjct: 1219 SLGYQP 1224


>06_03_0905 + 25843547-25844314
          Length = 255

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
 Frame = +1

Query: 820  PXXXPXTXXPPLXXH--PLRXPPDLXFPXXWEPTHXXXEPXSLXXPPXLRPXXXTGPXXQ 993
            P   P T  PP+     P+  PP +  P    PT     P  +  PP   P   T P   
Sbjct: 90   PPKGPVTRPPPVTYPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYP---TPPVTY 146

Query: 994  GTQPLXFSLP 1023
             T P+ +  P
Sbjct: 147  PTPPVTYPTP 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,501,783
Number of Sequences: 37544
Number of extensions: 243311
Number of successful extensions: 572
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3292969272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)