Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_L05
(904 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0701 + 6200351-6200470,6200879-6201104,6201502-6201747,620... 31 1.7
12_02_0648 + 21490202-21490296,21490547-21490634,21491216-214912... 30 2.2
04_04_1138 - 31162440-31163488,31163910-31164164,31164386-311645... 30 2.9
04_03_1044 - 21965237-21965341,21966130-21966300,21966414-219665... 29 3.8
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 29 5.1
02_05_1134 - 34352154-34352375,34353683-34353746,34353820-343548... 29 5.1
09_03_0007 - 11430123-11430513,11430605-11430794,11431114-114311... 29 6.7
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 28 8.8
03_02_0932 + 12495700-12495738,12495859-12496093,12496178-124964... 28 8.8
02_04_0376 - 22474473-22476947 28 8.8
>08_01_0701 +
6200351-6200470,6200879-6201104,6201502-6201747,
6201818-6201868,6202231-6202491,6202587-6202639,
6202705-6202819,6202985-6203239,6203773-6204827
Length = 793
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 441 YGARHVIKLFVPVTLCMLVVVATISSINFYSV-KDVYLAYTPFHEESPY--ASTKVWNAL 611
YG V LF P+ L +++ TI ++N + V AY P + + ++ W +L
Sbjct: 234 YGTDKVGWLFAPIVLLWFILIGTIGALNIHKYNSSVLKAYNPVYIYRYFRRGKSESWTSL 293
Query: 612 ANSMI 626
M+
Sbjct: 294 GGIML 298
>12_02_0648 +
21490202-21490296,21490547-21490634,21491216-21491260,
21491355-21491387,21491480-21491557,21491647-21491690,
21491765-21491805,21492102-21492184,21492261-21492352,
21492468-21492537,21492838-21492876,21493670-21493687,
21494586-21494713,21495235-21495358,21495585-21495716,
21496092-21496223,21496582-21496665
Length = 441
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -3
Query: 587 CVWTLFMKRC-ICQIYIFNGVKIYR*YCCNNYEHAQC-DRHKQFDDMASPILQLQLLNLW 414
CV + C IC Y+F+ +K R C + H +C + + PI L++
Sbjct: 155 CVENSMRQNCPICYEYLFDSLKGTRVLDCGHTMHMECFSEMVEHNKYTCPICSKTALDMT 214
Query: 413 FHW 405
HW
Sbjct: 215 HHW 217
>04_04_1138 -
31162440-31163488,31163910-31164164,31164386-31164500,
31164523-31164579,31164580-31164632,31164721-31164981,
31165243-31165293,31165395-31165430,31165815-31166040,
31166082-31166132,31166346-31166465
Length = 757
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 441 YGARHVIKLFVPVTLCMLVVVATISSINFYSVK-DVYLAYTPFH 569
YG V LF P+ L +++ ++ ++N + K V AY P +
Sbjct: 181 YGTDKVGWLFAPIVLLWFILIGSVGALNIHKYKGSVLKAYNPVY 224
>04_03_1044 -
21965237-21965341,21966130-21966300,21966414-21966564,
21968768-21969348
Length = 335
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = -3
Query: 542 IFNGVKIYR*YCCNNYEHAQCDRHKQFDDMASPILQLQLLNL---WFHWCCWNSRLLGNR 372
+FN ++ +CC + DR K + L L+ L L W WC S +LG
Sbjct: 256 LFNNLRNLSLHCCLRDKGNLSDRFKALGRLLQKSLNLEKLTLQDFWASWCRNTSSVLGKI 315
Query: 371 SXLMGHLQSVLHCHRSAD 318
L+ L + H ++D
Sbjct: 316 QVLVLLLFIPILLHVASD 333
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 441 YGARHVIKLFVPVTLCMLVVVATISSIN-FYSVKDVYLAYTPFHEESPYASTKVWNALAN 617
YG V LF P+ L+ ++ I N + VY A +P++ T+ ++
Sbjct: 212 YGTHRVGFLFAPIVCLWLLCISIIGVYNIIHWNPHVYQALSPYYMYKFLRKTQTGGWMSL 271
Query: 618 SMILLCV 638
ILLCV
Sbjct: 272 GGILLCV 278
>02_05_1134 -
34352154-34352375,34353683-34353746,34353820-34354859,
34355193-34355261,34355502-34355606,34355992-34356161,
34356244-34356351,34356397-34356525,34356577-34356681,
34357186-34357475,34357575-34357679,34358195-34358289,
34358474-34358569,34358660-34358782,34359120-34359174,
34359254-34359417,34359881-34359971,34360180-34360334,
34360823-34361002,34361314-34361487,34361776-34361917,
34362023-34362325,34362443-34362522
Length = 1354
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +3
Query: 489 MLVVVATISSINFYSVKDVYLAYTPFHEESPYASTKVW------NALANSMILLCVIALM 650
++VV++ S + YSV+ +Y+A F ++ VW L N++ +L +
Sbjct: 461 LVVVISNASELQGYSVRLLYMALQAFVDQGSLVRVAVWCIGEYGEMLVNNVGMLQGEEPI 520
Query: 651 TVLLIVLYKKKCYKTIHG 704
T+++ + + Y + G
Sbjct: 521 TIIIAIFFSAIIYLAVLG 538
>09_03_0007 -
11430123-11430513,11430605-11430794,11431114-11431182,
11431601-11431727,11431843-11432083,11432519-11432596,
11433004-11433109,11433560-11433625,11437021-11437043,
11438106-11438177,11438256-11438394,11439505-11439919
Length = 638
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 510 ISSINFYSVKDVYLAYTPFHEESPYASTKVWNALANSMILLCVIALMTVLL 662
I N Y D L YTP + + Y + VW + N + ++A LL
Sbjct: 64 IRQFNVYFNNDSPLLYTPLYLAADYVYSVVWYSSTNGKFNITLVATAKSLL 114
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 358 PIRXLLLPSNLEFQQHQWNHRLRSWS 435
P R LL+ N EF+ H+ N L WS
Sbjct: 267 PKRALLIGMNHEFEHHKENQTLAEWS 292
>03_02_0932 +
12495700-12495738,12495859-12496093,12496178-12496423,
12496519-12496572,12497329-12497589,12497750-12497802,
12497893-12498016,12498147-12498401,12498798-12499888,
12500001-12500007,12500316-12500445,12500617-12500731,
12500783-12500853,12501246-12501354,12501550-12501738,
12502519-12502644,12503048-12503563
Length = 1206
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 441 YGARHVIKLFVPVTLCMLVVVATISSIN-FYSVKDVYLAYTPFHEESPYASTKVWNALAN 617
YG V LF P+ L L+ ++ + N + VY A P + T+ + ++
Sbjct: 211 YGTHRVGFLFAPIVLAWLICMSALGLYNIIHWNPHVYQALNPCYMFKFLKKTRKYGWMSL 270
Query: 618 SMILLCV 638
ILLC+
Sbjct: 271 GGILLCM 277
>02_04_0376 - 22474473-22476947
Length = 824
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 187 MSESGSDLDATEHTALMDGHIAEARPDRXVS 279
MS++G +D + LMDGH + + D VS
Sbjct: 574 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 604
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,434,678
Number of Sequences: 37544
Number of extensions: 411744
Number of successful extensions: 1066
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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