Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_L02
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434     33   0.23 
05_01_0499 - 4166891-4166942,4167191-4167510                           31   1.2  
06_01_0931 + 7192519-7194075                                           31   1.6  
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016     31   1.6  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   4.9  
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769...    28   8.5  
10_08_1048 - 22553676-22554866                                         28   8.5  
07_03_0723 + 20954827-20954905,20954974-20956277                       28   8.5  
03_03_0204 + 15436660-15437244,15437355-15437632,15438792-154390...    28   8.5  

>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
          Length = 418

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -1

Query: 389 GMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMAL 273
           G   P R+SP    L+   PAEAALS  RSL S  P ++
Sbjct: 138 GEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSI 176


>05_01_0499 - 4166891-4166942,4167191-4167510
          Length = 123

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = -1

Query: 479 LIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAA 318
           LI   LALR   LL N +     PS SP+   +   R  P P + + ASP+ +A
Sbjct: 5   LIIVPLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASPSSSA 58


>06_01_0931 + 7192519-7194075
          Length = 518

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = -1

Query: 626 LPPAE*SFRLMTSECAALNDAPTFCLNM*STPPPSVLKLGALGMALGEFLIANALALRSW 447
           +PP +   R     CAAL  +P       S+ PPS         A    ++   +ALR+ 
Sbjct: 50  VPPGQTFERACIQACAALAFSPPAVAADLSSLPPS---------ASSPLVLVPNVALRTA 100

Query: 446 LLLW-NKLTLPATPSCSPKPGMRVPVRLSPCP 354
           +L W ++L+LP     SP     V  RL P P
Sbjct: 101 ILNWCDRLSLPYPAPLSPDTARDVVRRLMPSP 132


>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
          Length = 360

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 289 ADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVNL 432
           A  N+R + S AS  +A  + + HG+ + G   P +G     AG ++L
Sbjct: 173 AGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSL 220


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 417 CDAELLPEAGNAGPGQAQPV 358
           C A LLPE GN G GQ+  V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505


>12_01_0831 -
           7688342-7688772,7690678-7692610,7693142-7693915,
           7694019-7694142,7696084-7696189,7696346-7696532
          Length = 1184

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 377 PVRLSPCPFTLSRASPAEAA 318
           P+RLSP P ++SR  P+ AA
Sbjct: 153 PIRLSPSPRSMSRTRPSSAA 172


>10_08_1048 - 22553676-22554866
          Length = 396

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -1

Query: 539 STPPPSVLKLGALGMALGEFLIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSP 360
           ST PP +L       A  E L+    A+R+ +   N L     P   P P + +  RL+P
Sbjct: 47  STAPPLLLPAAHQAQAQDEQLLRQLTAIRATVSQLNHLRSSTPPPPPPPPELLLYSRLAP 106


>07_03_0723 + 20954827-20954905,20954974-20956277
          Length = 460

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 404 CSPKPGMRVPVR-LSPCPFTLSRASPAEAALSLWR 303
           CSP P  R+P+R  + C     +ASP   + + WR
Sbjct: 62  CSPAPSARIPLRGFTDCRL---KASPGSGSFTRWR 93


>03_03_0204 +
           15436660-15437244,15437355-15437632,15438792-15439068,
           15439160-15439405,15440853-15441134
          Length = 555

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -1

Query: 431 KLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKS 291
           K + P+  +    P    P  ++P P    + +PA  A+  WR+ K+
Sbjct: 59  KTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKA 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,196,681
Number of Sequences: 37544
Number of extensions: 426480
Number of successful extensions: 1371
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)