Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_L02
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 28 7.6
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 28 7.6
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 28 7.6
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 437 WNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRAS 333
W K T TPS S KP + P R P P S+ S
Sbjct: 1980 WAKTTTSQTPSTSTKPTVTAPKRSDPIPIAPSQRS 2014
>Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical protein
W10C6.1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 599 LMTSECAALNDAPTFCLNM*STPPPSVLKLGALGMALGEFLIANALAL 456
+MTS A + + +N+ + P+ + LG + M + IANALAL
Sbjct: 936 MMTSSQVANHVKESEYINIHQSAEPAAIALGMMFMKMNNEFIANALAL 983
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 253 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 429
G D N+++ FN+R K+ + L+ + + G ++PG + K
Sbjct: 277 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 336
Query: 430 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 540
++ N H + A+ ++P + + N+ G +
Sbjct: 337 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 373
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 253 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 429
G D N+++ FN+R K+ + L+ + + G ++PG + K
Sbjct: 252 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 311
Query: 430 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 540
++ N H + A+ ++P + + N+ G +
Sbjct: 312 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 348
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 253 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 429
G D N+++ FN+R K+ + L+ + + G ++PG + K
Sbjct: 311 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 370
Query: 430 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 540
++ N H + A+ ++P + + N+ G +
Sbjct: 371 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 407
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 458 LRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAA 318
++ W W PA P +P+P + PV P SP +AA
Sbjct: 983 VKKWKPPWEDDDEPAEPVSAPEPEKKTPVLAKKAPAKPRDPSPKKAA 1029
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 253 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 429
G D N+++ FN+R K+ + L+ + + G ++PG + K
Sbjct: 252 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 311
Query: 430 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 540
++ N H + A+ ++P + + N+ G +
Sbjct: 312 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 348
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 253 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 429
G D N+++ FN+R K+ + L+ + + G ++PG + K
Sbjct: 311 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 370
Query: 430 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 540
++ N H + A+ ++P + + N+ G +
Sbjct: 371 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,368,803
Number of Sequences: 27780
Number of extensions: 319382
Number of successful extensions: 921
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -