Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_L01
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 35 0.088
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 34 0.15
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 34 0.15
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.27
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.27
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.27
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.27
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.27
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.62
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.62
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 1.4
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 1.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.4
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 1.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 1.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 1.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.9
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 29 4.4
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 5.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 5.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 5.8
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 28 7.7
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 28 7.7
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 28 7.7
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 28 7.7
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 7.7
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 7.7
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +1
Query: 559 SXFFXPXXGGGGGVFXXKXNPPPPXGXGGXFXGPPXPPP 675
S F P GGGGG PPP G GG G PPP
Sbjct: 15 SAFLFPS-GGGGGCGCAPPPPPPACGCGGGGGGYAAPPP 52
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 587 GGGGFFXXXKTPPPPXGXGXFFXAPPXPPP 676
G GG PPP G G F PP PPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 672 GGXGGAXKXXPXPXGGGGVXFXXKNPPPPP 583
G GG+ P P GG F PPPPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +2
Query: 584 GGGGGFFXXXKTPPP-PXGXGXFFXAPPXPPP 676
GG GGF PPP P A P PPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 587 GGGGFFXXXKTPPPPXGXGXFFXAPPXPPP 676
G GG PPP G G F PP PPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 672 GGXGGAXKXXPXPXGGGGVXFXXKNPPPPP 583
G GG+ P P GG F PPPPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +2
Query: 584 GGGGGFFXXXKTPPP-PXGXGXFFXAPPXPPP 676
GG GGF PPP P A P PPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 693 GXGXFXGGGXGGAXKXXPXPXGGGGVXFXXKNPPPPP 583
G G GGG GG GGGG PPPPP
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPP 59
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 693 GXGXFXGGGXGGAXKXXPXPXGGGGVXFXXKNPPPPP 583
G G GGG GG GGGG PPPPP
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPPXKXXXP 693
PPPP GG GPP PPP P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 583 GGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXP 693
GG + PPPP G GPP PPP P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 574 PXXGGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXP 693
P GG + PPPP G GPP PPP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPPXKXXXP 693
PPPP G GPP PPP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 466 PXXXGGGAPXPXXXFXXGGXPPPPXXGAPP 377
P GG P P GG PPPP G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -3
Query: 866 GGXXPXX--TPPPXXPXWGAPPXGXXXPXXFFXXGPP 762
GG P PPP P G PP P F GPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPP 675
PPPP G F G P PPP
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 592 GGVFXXKXNPPPPXGXGGXFXGPPXPPP 675
GG+ PPPP G PP PPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPP 675
PPPP GG PP PPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 282 PPXXXXXPXPPPXGXXXXXXXXXXXXXXXXXXGGAPXXGGGGXPPXXKXXXGXGAPPPXX 461
PP P PPP G GG P GG PP PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 462 XG 467
G
Sbjct: 777 PG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPPXKXXXP 693
PPPP GG GPP PPP P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 583 GGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXP 693
GG + PPPP G GPP PPP P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 574 PXXGGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXP 693
P GG + PPPP G GPP PPP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPPXKXXXP 693
PPPP G GPP PPP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 466 PXXXGGGAPXPXXXFXXGGXPPPPXXGAPP 377
P GG P P GG PPPP G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -3
Query: 866 GGXXPXX--TPPPXXPXWGAPPXGXXXPXXFFXXGPP 762
GG P PPP P G PP P F GPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPP 675
PPPP G F G P PPP
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 592 GGVFXXKXNPPPPXGXGGXFXGPPXPPP 675
GG+ PPPP G PP PPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPP 675
PPPP GG PP PPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 282 PPXXXXXPXPPPXGXXXXXXXXXXXXXXXXXXGGAPXXGGGGXPPXXKXXXGXGAPPPXX 461
PP P PPP G GG P GG PP PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 462 XG 467
G
Sbjct: 777 PG 778
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +2
Query: 584 GGGGGFFXXXKTPPPPXGXGXFFXAPPXPPPXKXPXPG 697
GG GGF PPPP G G + P PP P PG
Sbjct: 428 GGPGGF-----GPPPPGGPGAYGPPPTGFPPVGAPPPG 460
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 8/74 (10%)
Frame = -3
Query: 449 GGPXPPXXFXXGGXXPPPPXG-----GPPXXXXXXXXXXXXXXXXFXXPGGGGGXXXXXG 285
GGP PP G PPP G PP P GG G G
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYG 424
Query: 284 ---GGXXFFXXPPP 252
GG F PPP
Sbjct: 425 PPQGGPGGFGPPPP 438
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +1
Query: 382 GPPXGG-GGXXPPXKKXXGGXGPPP 453
GPP GG GG PP G GPPP
Sbjct: 424 GPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/112 (25%), Positives = 31/112 (27%), Gaps = 5/112 (4%)
Frame = +1
Query: 379 GGPPXGGGGXXPPXK-----KXXGGXGPPPXKXXEKXALXXKKXGXPAXXXXXXXXXXXX 543
GGPP G G PP + G PPP + G P
Sbjct: 341 GGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAP 400
Query: 544 XXXRXSXFFXPXXGGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXPXG 699
+ P GG G PP G GG PP P P G
Sbjct: 401 QGPGGPGGYGPPPPGGPGA--PGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG 450
Score = 29.9 bits (64), Expect = 2.5
Identities = 28/106 (26%), Positives = 31/106 (29%), Gaps = 2/106 (1%)
Frame = +1
Query: 388 PXGGGGXXPPXKKXXGGXGPPPXKXXE-KXALXXKKXGXPAXXXXXXXXXXXXXXXRXSX 564
P GG PP G PPP A G P +
Sbjct: 361 PQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAP 420
Query: 565 -FFXPXXGGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXPXG 699
+ P GG GG PPPP G G + PP P P G
Sbjct: 421 GSYGPPQGGPGGF-----GPPPPGG-PGAYGPPPTGFPPVGAPPPG 460
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPPXKXXXP 693
PPPP GG GPP PPP P
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 583 GGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXP 693
GG + PPPP G GPP PPP P
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 574 PXXGGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXP 693
P GG + PPPP G GPP PPP P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPPXKXXXP 693
PPPP G GPP PPP P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 466 PXXXGGGAPXPXXXFXXGGXPPPPXXGAPP 377
P GG P P GG PPPP G P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLP 319
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -3
Query: 866 GGXXPXX--TPPPXXPXWGAPPXGXXXPXXFFXXGPP 762
GG P PPP P G PP P F GPP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPP 675
PPPP G F G P PPP
Sbjct: 353 PPPPPPPPGGFKGGPPPPP 371
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 592 GGVFXXKXNPPPPXGXGGXFXGPPXPPP 675
GG+ PPPP G PP PPP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPP 675
PPPP GG PP PPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPP 360
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 282 PPXXXXXPXPPPXGXXXXXXXXXXXXXXXXXXGGAPXXGGGGXPPXXKXXXGXGAPPPXX 461
PP P PPP G GG P GG PP PPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 462 XG 467
G
Sbjct: 360 PG 361
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPP 675
PPPP GG + PP PPP
Sbjct: 41 PPPPPPCGGGYEAPPPPPP 59
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPPXKXXXP 693
PPPP GG PP PPP P
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGGP 66
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 693 GXGXFXGGGXGGAXK--XXPXPXGGGGVXFXXKNPPPPP 583
G G + GGG GG GGGG PPPPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 587 GGGGFFXXXKTPPPPXGXGXFFXAPPXPPPXKXP 688
GGGG+ PPPP PP PPP P
Sbjct: 291 GGGGYSAPAAAPPPP--------PPPPPPPAPAP 316
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 693 GXGXFXGGGXGGAXK--XXPXPXGGGGVXFXXKNPPPPP 583
G G + GGG GG GGGG PPPPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 587 GGGGFFXXXKTPPPPXGXGXFFXAPPXPPPXKXP 688
GGGG+ PPPP PP PPP P
Sbjct: 291 GGGGYSAPAAAPPPP--------PPPPPPPAPAP 316
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 381 GAPXXGGGGXPPXXKXXXGXGAPPP 455
GAP GGG PP G G PPP
Sbjct: 800 GAPGGGGGMYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 381 GAPXXGGGGXPPXXKXXXGXGAPPP 455
GAP GGG PP G G PPP
Sbjct: 800 GAPGGGGGMYPPLIPTRPGPGGPPP 824
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +1
Query: 559 SXFFXPXXGGGGGVFXXKXNPPPPXGXGGXFXGPPXPP 672
S F GGGGG PPPP G G GP PP
Sbjct: 14 SQAFLLPSGGGGGCGCAPPPPPPPCGCG----GPSLPP 47
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 569 FXXXXGGGGGFFXXXKTPPPPXGXGXFFXAPPXPPPXKXP 688
F GGGGG PPPP G G P PP + P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGG-----PSLPPLQLP 51
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -1
Query: 472 FFPXXXG-GGAPXPXXXFXXGGXPPPPXXGAPP 377
F P G GG P P F G PPPP G P
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIP 105
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 385 PPXGGGGXXPPXKKXXGGXGPPP 453
PP G GG PP GG PPP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPP 98
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 466 PXXXGGGAPXPXXXFXXGGXPPPPXXGAPP 377
P GG P P G PPPP GAPP
Sbjct: 87 PPMFAGGIPPPPPMMG-GIPPPPPMFGAPP 115
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 620 PPPPXGXGXFFXAPPXPPPXKXPXP 694
PPPP G + PP PPP + P P
Sbjct: 287 PPPPPSSG-MWPPPPPPPPGRTPGP 310
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 622 PPPXGXGGXFXGPPXPPPXKXXXPXG 699
PPP G + PP PPP + P G
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPG 312
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 620 PPPPXGXGXFFXAPPXPPPXKXPXP 694
PPPP G + PP PPP + P P
Sbjct: 297 PPPPPSSG-MWPPPPPPPPGRTPGP 320
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 622 PPPXGXGGXFXGPPXPPPXKXXXPXG 699
PPP G + PP PPP + P G
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPG 322
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +2
Query: 569 FXXXXGGGGGFFXXXKTPPPPXGXGXFFXAPPXPP 673
F GGGGG PPPP G G AP PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCG----APALPP 47
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +2
Query: 569 FXXXXGGGGGFFXXXKTPPPPXGXGXFFXAPPXPP 673
F GGGGG PPPP G G AP PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCG----APALPP 47
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = +1
Query: 559 SXFFXPXXGGGGG-----VFXXKXNPPPPXGXGGXFXGPPXPPP 675
S F P GGGGG PPPP G PP PPP
Sbjct: 16 SGFLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 584 GGGGGFFXXXKT--PPPPXGXGXFFXAPPXPPPXKXPXPG 697
GGGGG PPPP G APP PPP P G
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGC---APPPPPPPPPPMCG 63
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/84 (25%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Frame = +3
Query: 258 GXXKKXXPPPXXXXXPXPPPXGXXXXXXXXXXXXXXXXXXGGAPXXGGGGXPPXXK--XX 431
G K PP P PPP G P G PP
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Query: 432 XGXGAPPPXXXGKKXPXXKKXGXP 503
G+PPP G P G P
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -1
Query: 598 PPPPPPXXXKKXXXXXXXXXXXXXXXGXXKXXGXPXFXKXGXFFPXXXGGGAPXPXXXFX 419
PPPPPP G P + G P G P P
Sbjct: 237 PPPPPPPKGS-------PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP----- 284
Query: 418 XGGXPPPPXXGAPP 377
GG PPPP G+PP
Sbjct: 285 AGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/84 (25%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Frame = +3
Query: 258 GXXKKXXPPPXXXXXPXPPPXGXXXXXXXXXXXXXXXXXXGGAPXXGGGGXPPXXK--XX 431
G K PP P PPP G P G PP
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Query: 432 XGXGAPPPXXXGKKXPXXKKXGXP 503
G+PPP G P G P
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -1
Query: 598 PPPPPPXXXKKXXXXXXXXXXXXXXXGXXKXXGXPXFXKXGXFFPXXXGGGAPXPXXXFX 419
PPPPPP G P + G P G P P
Sbjct: 258 PPPPPPPKGS-------PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP----- 305
Query: 418 XGGXPPPPXXGAPP 377
GG PPPP G+PP
Sbjct: 306 AGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/84 (25%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Frame = +3
Query: 258 GXXKKXXPPPXXXXXPXPPPXGXXXXXXXXXXXXXXXXXXGGAPXXGGGGXPPXXK--XX 431
G K PP P PPP G P G PP
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Query: 432 XGXGAPPPXXXGKKXPXXKKXGXP 503
G+PPP G P G P
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -1
Query: 598 PPPPPPXXXKKXXXXXXXXXXXXXXXGXXKXXGXPXFXKXGXFFPXXXGGGAPXPXXXFX 419
PPPPPP G P + G P G P P
Sbjct: 243 PPPPPPPKGS-------PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP----- 290
Query: 418 XGGXPPPPXXGAPP 377
GG PPPP G+PP
Sbjct: 291 AGGSPPPPRAGSPP 304
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 574 PXXGGGGGVFXXKXNPPPPXGXGGXFXGPPXPPPXKXXXP 693
P G G NP PP G GPP PP + P
Sbjct: 119 PGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPP 158
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 378 GGAPXXGGGGXPPXXKXXXGXGAPPPXXXGKKXP 479
GG P GG G PP G G PPP G P
Sbjct: 181 GGPPGHGGQGGPP---GHGGMGGPPPGQGGPGGP 211
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 378 GGAPXXGGGGXPPXXKXXXGXGAPPPXXXGKKXP 479
GG P GG G PP G G PPP G P
Sbjct: 461 GGPPGHGGQGGPP---GHGGMGGPPPGQGGPGGP 491
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/111 (26%), Positives = 34/111 (30%), Gaps = 4/111 (3%)
Frame = +1
Query: 379 GGPPXGGGGXXPPXKKXXGGXGPPPXKXXEKXALXXKKXGXPAXXXXXXXXXXXXXXXRX 558
GGPP GG P + G P + ++ G P
Sbjct: 1500 GGPPMFRGGPPGPGR----GMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPP 1555
Query: 559 SXFFXPXXGGGGGVFXXKXNPPPPXGXGGXFXGPP----XPPPXKXXXPXG 699
P GG G + PPPP G G GPP PPP P G
Sbjct: 1556 MGGLPPPHGGMNG---WRGGPPPPRG-GSHCQGPPPLMGGPPPRLGMPPPG 1602
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 449 GGPXPPXXFXXGGXXPPPPXGGPP 378
GGP P G PPPP GGPP
Sbjct: 1590 GGPPPRLGMPPPG--PPPPNGGPP 1611
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = -2
Query: 693 GXGXFXGGGXGGAXKXXPXPXGGGGVXFXXKNP-----PPPP 583
G G F GGG GG GGGG F +P P PP
Sbjct: 476 GFGSFGGGGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPP 517
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.3
Identities = 38/158 (24%), Positives = 40/158 (25%), Gaps = 3/158 (1%)
Frame = +1
Query: 379 GGPPXGGGGXXPPXKKXXGGXGPPPXKXXEKXALXXKKXGXPAXXXXXXXXXXXXXXXRX 558
GG GGGG G G P K + K G P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPG-----KPGAPGAPGNPGKGASAPCEPVT 143
Query: 559 SXFFXPXXGGGGGVFXXKX--NPPPPXGXGGXFXGPPXPPPXKXXXPXG-XXXXXXXXXX 729
P GG G PP P G G GP P P P G
Sbjct: 144 QPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Query: 730 XXXXXXXXTXXGGPXXKXXXGXXXPXGGAPQXGXXGGG 843
+ GGP G P G A G G G
Sbjct: 204 GGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTG 241
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 3.3
Identities = 38/158 (24%), Positives = 40/158 (25%), Gaps = 3/158 (1%)
Frame = +1
Query: 379 GGPPXGGGGXXPPXKKXXGGXGPPPXKXXEKXALXXKKXGXPAXXXXXXXXXXXXXXXRX 558
GG GGGG G G P K + K G P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPG-----KPGAPGAPGNPGKGASAPCEPVT 143
Query: 559 SXFFXPXXGGGGGVFXXKX--NPPPPXGXGGXFXGPPXPPPXKXXXPXG-XXXXXXXXXX 729
P GG G PP P G G GP P P P G
Sbjct: 144 QPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Query: 730 XXXXXXXXTXXGGPXXKXXXGXXXPXGGAPQXGXXGGG 843
+ GGP G P G A G G G
Sbjct: 204 GGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTG 241
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 3.3
Identities = 38/158 (24%), Positives = 40/158 (25%), Gaps = 3/158 (1%)
Frame = +1
Query: 379 GGPPXGGGGXXPPXKKXXGGXGPPPXKXXEKXALXXKKXGXPAXXXXXXXXXXXXXXXRX 558
GG GGGG G G P K + K G P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPG-----KPGAPGAPGNPGKGASAPCEPVT 143
Query: 559 SXFFXPXXGGGGGVFXXKX--NPPPPXGXGGXFXGPPXPPPXKXXXPXG-XXXXXXXXXX 729
P GG G PP P G G GP P P P G
Sbjct: 144 QPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Query: 730 XXXXXXXXTXXGGPXXKXXXGXXXPXGGAPQXGXXGGG 843
+ GGP G P G A G G G
Sbjct: 204 GGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTG 241
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.3
Identities = 38/158 (24%), Positives = 40/158 (25%), Gaps = 3/158 (1%)
Frame = +1
Query: 379 GGPPXGGGGXXPPXKKXXGGXGPPPXKXXEKXALXXKKXGXPAXXXXXXXXXXXXXXXRX 558
GG GGGG G G P K + K G P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPG-----KPGAPGAPGNPGKGASAPCEPVT 143
Query: 559 SXFFXPXXGGGGGVFXXKX--NPPPPXGXGGXFXGPPXPPPXKXXXPXG-XXXXXXXXXX 729
P GG G PP P G G GP P P P G
Sbjct: 144 QPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Query: 730 XXXXXXXXTXXGGPXXKXXXGXXXPXGGAPQXGXXGGG 843
+ GGP G P G A G G G
Sbjct: 204 GGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTG 241
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 382 GPPXGGGGXXPPXKKXXGGXGPPP 453
GPP GG G PP + GPPP
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPP 695
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 382 GPPXGGGGXXPPXKKXXGGXGPPP 453
GPP GG G PP + GPPP
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPP 695
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 617 TPPPPXGXGXFFXAPPXPPP 676
TPPPP G PP PPP
Sbjct: 537 TPPPPPPVGMANGGPPPPPP 556
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 619 PPPPXGXGGXFXGPPXPPPXKXXXPXG 699
PPPP G F GP PP P G
Sbjct: 25 PPPPNDSGHEFIGPSSGPPQVTITPSG 51
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 378 GGAPXXGGGGXPPXXKXXXGXGAPPPXXXGKKXPXXKKXGXP 503
GG GGGG PP G G P K P K G P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPK-PPAKPRGRP 656
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 378 GGAPXXGGGGXPPXXKXXXGXGAPPPXXXGKKXPXXKKXGXP 503
GG GGGG PP G G P K P K G P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPK-PPAKPRGRP 656
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 871 SGGGXXRXXXPPPXXXXGGRR 809
SGGG R PPP GGRR
Sbjct: 204 SGGGSGRFPPPPPPYGGGGRR 224
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 451 GGAPXPXXXFXXGGXPPPPXXGAP 380
GG P P G PPPP G P
Sbjct: 115 GGGPGPHHHHHHHGPPPPPYYGRP 138
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 451 GGAPXPXXXFXXGGXPPPPXXGAP 380
GG P P G PPPP G P
Sbjct: 115 GGGPGPHHHHHHHGPPPPPYYGRP 138
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 381 GAPXXGGGGXPPXXKXXXGXGAPPPXXXGKKXP 479
G P GG G PP G PPP G P
Sbjct: 40 GNPCGGGFGPPPPPFGPVGYALPPPPPNGYALP 72
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 559 SXFFXPXXGGGGGVFXXKXNPPPPXGXGGXFXGPP 663
S F P GGGG PPP G GG PP
Sbjct: 15 SAFLFPSGGGGG--CGCAPPPPPACGCGGGAAPPP 47
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +1
Query: 559 SXFFXPXXGGGGGVFXXKXNPPPP--XGXGGXFXGPPXPPPXKXXXP 693
S F P GGGGG PPPP G PPP P
Sbjct: 15 SAFLFPSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAP 61
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 680 LXGGGXGGPXKXPPXPXGGGG 618
L GGG GG PP P GGG
Sbjct: 20 LLGGGGGGCCAPPPPPPCGGG 40
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 614 KTPPPPXGXGXFFXAPPXPP 673
K PPP G FF APP P
Sbjct: 321 KPNPPPPSAGYFFQAPPPAP 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.151 0.509
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,768,419
Number of Sequences: 27780
Number of extensions: 360212
Number of successful extensions: 3415
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2688
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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