Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_K22
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0585 + 4332352-4332445,4332552-4332667                           80   3e-15
06_03_0967 - 26395537-26396590,26400918-26401111                       49   4e-06
08_01_0649 + 5607234-5608397,5609358-5609513,5609598-5609796,561...    30   2.2  
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353...    29   3.9  
07_01_0080 + 587674-588510                                             26   4.8  
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856...    24   8.3  
06_01_0763 + 5712466-5712721,5714302-5715743                           28   9.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       24   9.5  

>02_01_0585 + 4332352-4332445,4332552-4332667
          Length = 69

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 39/68 (57%), Positives = 46/68 (67%)
 Frame = +3

Query: 153 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 332
           MD +   V+P ++FAKDS+RLV+RC KPDRKEF K+A  TA            VKLI IP
Sbjct: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 333 INNIIVGS 356
           INNIIVGS
Sbjct: 61  INNIIVGS 68


>06_03_0967 - 26395537-26396590,26400918-26401111
          Length = 415

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 21/37 (56%), Positives = 29/37 (78%)
 Frame = +3

Query: 153 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIA 263
           MD I   V+P ++FAKDS+RLV+RC KPDRK  +++A
Sbjct: 1   MDAIDSVVDPLREFAKDSVRLVKRCHKPDRKGRERLA 37


>08_01_0649 +
           5607234-5608397,5609358-5609513,5609598-5609796,
           5612419-5613608,5614505-5614660,5614742-5615041
          Length = 1054

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -1

Query: 353 ADNYVINGDMNQLYKESNEAHDAKSDGCCN--GNLLEFFPIRFC--ASSH*SDGVLSELL 186
           AD Y  NGD    Y+ +   HD+ + G  N  GNL   FP++    AS+H  + +L  LL
Sbjct: 338 ADEYSSNGDPGDEYRGNYVNHDSANYGRANKFGNL--NFPVKSIVDASAHEGELLLRRLL 395

Query: 185 ARLDEFCDL 159
                F +L
Sbjct: 396 ENFPMFNNL 404


>09_02_0048 -
           3532663-3533475,3534086-3534589,3534715-3535740,
           3536083-3536226,3536974-3537375,3537499-3537721,
           3537830-3542368,3542480-3542599,3543005-3543038,
           3543922-3544102,3544198-3544815,3545022-3551098,
           3551139-3551304,3551508-3551614,3552056-3552178,
           3553417-3553642
          Length = 5100

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = -1

Query: 269 CNGNLLEFFPIRFCASSH*----SDGVLSELLARLDEFCDLIHY*INNSTI 129
           C  +L   F ++F  ++H      DGV + LL  LDEF  LIH    NS I
Sbjct: 345 CTDSLPVLFKLKFKFANHDRVFSGDGVGTVLLQILDEFLQLIHIIFCNSDI 395


>07_01_0080 + 587674-588510
          Length = 278

 Score = 26.2 bits (55), Expect(2) = 4.8
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 871 PXXXGXGGFFFXXKXPPPPPP 809
           P   G  G F     PPPPPP
Sbjct: 79  PPRLGGDGMFRRPPPPPPPPP 99



 Score = 21.4 bits (43), Expect(2) = 4.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 826 PPPPPPXXXKK 794
           PPPPPP   ++
Sbjct: 116 PPPPPPLFTRR 126


>03_03_0038 +
           13984525-13984917,13985351-13985429,13985535-13985628,
           13985712-13985844
          Length = 232

 Score = 24.2 bits (50), Expect(2) = 8.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 826 PPPPPPXXXKKKK 788
           PPPPPP   K K+
Sbjct: 82  PPPPPPKQEKAKR 94



 Score = 22.6 bits (46), Expect(2) = 8.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 832 KXPPPPPP 809
           K PPPPPP
Sbjct: 37  KPPPPPPP 44


>06_01_0763 + 5712466-5712721,5714302-5715743
          Length = 565

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 263 HCNSHRILHHGLHWILCKADSY 328
           +C+ HR   H + W++ + DSY
Sbjct: 280 YCDDHRQFLHRVQWVILRTDSY 301


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 23.8 bits (49), Expect(2) = 9.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 826 PPPPPPXXXKK 794
           PPPPPP   KK
Sbjct: 364 PPPPPPPGGKK 374



 Score = 22.6 bits (46), Expect(2) = 9.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 832 KXPPPPPP 809
           K PPPPPP
Sbjct: 351 KGPPPPPP 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,705,781
Number of Sequences: 37544
Number of extensions: 353825
Number of successful extensions: 3677
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3238
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)