Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_K19
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26594-1|CAA81348.1| 144|Homo sapiens T cell receptor beta chai... 35 0.43
X04932-1|CAA28596.1| 140|Homo sapiens protein ( Human mRNA for ... 35 0.43
U66060-1|AAC13323.1| 115|Homo sapiens V_segment translation pro... 35 0.43
U66059-28|AAC80199.1| 115|Homo sapiens V_segment translation pr... 35 0.43
BC110303-1|AAI10304.1| 312|Homo sapiens Unknown (protein for MG... 35 0.43
AJ004872-1|CAA06181.1| 309|Homo sapiens TCR beta chain protein. 35 0.43
AF043179-1|AAC08953.1| 313|Homo sapiens T cell receptor beta ch... 35 0.43
AF009663-2|AAB63900.1| 115|Homo sapiens TCRBV13S1 protein. 35 0.43
AF009662-1|AAC18429.1| 115|Homo sapiens TCRBV6S5 protein. 35 0.43
X74848-1|CAA52840.1| 140|Homo sapiens T-cell receptor beta chai... 33 1.7
X57721-1|CAA40888.1| 113|Homo sapiens TCR Vbeta 13.4b protein. 33 1.7
X57606-1|CAA40832.1| 113|Homo sapiens TCR Vbeta 13.4a protein. 33 1.7
U66060-4|AAC13326.1| 115|Homo sapiens V_segment translation pro... 33 1.7
S60794-1|AAB19723.1| 139|Homo sapiens T cell receptor variable ... 33 1.7
AY475217-1|AAS48057.1| 315|Homo sapiens T cell antigen receptor... 33 1.7
AF009663-11|AAB63902.1| 114|Homo sapiens TCRBV13S7 protein. 33 1.7
AF009663-5|AAB63901.1| 115|Homo sapiens TCRBV13S6 protein. 33 1.7
AF009662-4|AAC18430.1| 115|Homo sapiens TCRBV13S6 protein. 33 1.7
X75419-1|CAA53171.1| 98|Homo sapiens protein ( H.sapiens TCR V... 32 3.0
U66059-13|AAC80204.1| 115|Homo sapiens V_segment translation pr... 32 3.0
U07975-2|AAA50583.1| 113|Homo sapiens T cell receptor beta prot... 32 3.0
AF009660-2|AAC13346.1| 115|Homo sapiens V_segment translation p... 32 3.0
Z81026-1|CAB02683.1| 154|Homo sapiens TCR beta protein. 31 5.3
X75418-1|CAA53170.1| 98|Homo sapiens TCR V Beta 13.2 protein. 30 9.2
X61445-1|CAA43685.1| 115|Homo sapiens TCR V-beta 13.2 protein. 30 9.2
U66059-10|AAC80202.1| 115|Homo sapiens V_segment translation pr... 30 9.2
U07978-5|AAA50593.1| 113|Homo sapiens T cell receptor beta prot... 30 9.2
U07978-2|AAA50591.1| 113|Homo sapiens T cell receptor beta prot... 30 9.2
U07976-2|AAA50586.1| 113|Homo sapiens T cell receptor beta prot... 30 9.2
>Z26594-1|CAA81348.1| 144|Homo sapiens T cell receptor beta chain
variable region protein.
Length = 144
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>X04932-1|CAA28596.1| 140|Homo sapiens protein ( Human mRNA for
T-cell receptor beta-chain (clone HBVP34) (Family
Member: V beta 13.2, D beta 1.1, J beta 1.2, C beta 1).
).
Length = 140
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>U66060-1|AAC13323.1| 115|Homo sapiens V_segment translation
product protein.
Length = 115
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>U66059-28|AAC80199.1| 115|Homo sapiens V_segment translation
product protein.
Length = 115
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>BC110303-1|AAI10304.1| 312|Homo sapiens Unknown (protein for
MGC:117429) protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>AJ004872-1|CAA06181.1| 309|Homo sapiens TCR beta chain protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>AF043179-1|AAC08953.1| 313|Homo sapiens T cell receptor beta chain
protein.
Length = 313
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>AF009663-2|AAB63900.1| 115|Homo sapiens TCRBV13S1 protein.
Length = 115
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>AF009662-1|AAC18429.1| 115|Homo sapiens TCRBV6S5 protein.
Length = 115
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L L AGPVNAGV F L+ G S + D
Sbjct: 2 SIGLLCCAALSLLWAGPVNAGVTQTPKFQVLKTGQSMTLQCAQD 45
>X74848-1|CAA52840.1| 140|Homo sapiens T-cell receptor beta chain
protein.
Length = 140
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SISLLCCAAFPLLWAGPVNAGV 23
>X57721-1|CAA40888.1| 113|Homo sapiens TCR Vbeta 13.4b protein.
Length = 113
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SISLLCCAAFPLLWAGPVNAGV 23
>X57606-1|CAA40832.1| 113|Homo sapiens TCR Vbeta 13.4a protein.
Length = 113
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SISLLCCAAFPLLWAGPVNAGV 23
>U66060-4|AAC13326.1| 115|Homo sapiens V_segment translation
product protein.
Length = 115
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SISLLCCAAFPLLWAGPVNAGV 23
>S60794-1|AAB19723.1| 139|Homo sapiens T cell receptor variable
region beta chain protein.
Length = 139
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SISLLCCAAFPLLWAGPVNAGV 23
>AY475217-1|AAS48057.1| 315|Homo sapiens T cell antigen receptor
beta chain protein.
Length = 315
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SISLLCCAAFPLLWAGPVNAGV 23
>AF009663-11|AAB63902.1| 114|Homo sapiens TCRBV13S7 protein.
Length = 114
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGVNGF--FNDLRRGISQVEEXLSD 234
S+ +LCCA L AGPVNAGV F+ L+ G S + D
Sbjct: 2 SLGLLCCAAFSLLWAGPVNAGVTQTPKFHILKTGQSMTLQCAQD 45
>AF009663-5|AAB63901.1| 115|Homo sapiens TCRBV13S6 protein.
Length = 115
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SISLLCCAAFPLLWAGPVNAGV 23
>AF009662-4|AAC18430.1| 115|Homo sapiens TCRBV13S6 protein.
Length = 115
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SISLLCCAAFPLLWAGPVNAGV 23
>X75419-1|CAA53171.1| 98|Homo sapiens protein ( H.sapiens TCR V
Beta 13.2 gene (allele b). ).
Length = 98
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SLGLLCCAAFSLLWAGPVNAGV 23
>U66059-13|AAC80204.1| 115|Homo sapiens V_segment translation
product protein.
Length = 115
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCC V L AGPVNAGV
Sbjct: 2 SLGLLCCGVFSLLWAGPVNAGV 23
>U07975-2|AAA50583.1| 113|Homo sapiens T cell receptor beta
protein.
Length = 113
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SLGLLCCAAFSLLWAGPVNAGV 23
>AF009660-2|AAC13346.1| 115|Homo sapiens V_segment translation
product protein.
Length = 115
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCCA L AGPVNAGV
Sbjct: 2 SLGLLCCAAFSLLWAGPVNAGV 23
>Z81026-1|CAB02683.1| 154|Homo sapiens TCR beta protein.
Length = 154
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAG 171
S+ +LCCA L AGPVNAG
Sbjct: 2 SISLLCCAAFPLLWAGPVNAG 22
>X75418-1|CAA53170.1| 98|Homo sapiens TCR V Beta 13.2 protein.
Length = 98
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCC L AGPVNAGV
Sbjct: 2 SLGLLCCGAFSLLWAGPVNAGV 23
>X61445-1|CAA43685.1| 115|Homo sapiens TCR V-beta 13.2 protein.
Length = 115
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCC L AGPVNAGV
Sbjct: 2 SLGLLCCGAFSLLWAGPVNAGV 23
>U66059-10|AAC80202.1| 115|Homo sapiens V_segment translation
product protein.
Length = 115
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCC L AGPVNAGV
Sbjct: 2 SLGLLCCGAFSLLWAGPVNAGV 23
>U07978-5|AAA50593.1| 113|Homo sapiens T cell receptor beta
protein.
Length = 113
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCC L AGPVNAGV
Sbjct: 2 SLGLLCCGAFSLLWAGPVNAGV 23
>U07978-2|AAA50591.1| 113|Homo sapiens T cell receptor beta
protein.
Length = 113
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCC L AGPVNAGV
Sbjct: 2 SLGLLCCGAFSLLWAGPVNAGV 23
>U07976-2|AAA50586.1| 113|Homo sapiens T cell receptor beta
protein.
Length = 113
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 109 SVFILCCAVLILNXAGPVNAGV 174
S+ +LCC L AGPVNAGV
Sbjct: 2 SLGLLCCGAFSLLWAGPVNAGV 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,050,702
Number of Sequences: 237096
Number of extensions: 1304021
Number of successful extensions: 2549
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2549
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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