Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_K16
(890 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.70
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.93
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 25 0.93
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 1.2
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.6
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 24 1.6
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 24 2.1
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 23 4.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 8.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 8.6
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.4 bits (53), Expect = 0.70
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 700 RIPSNLAATKASPGSDTASANVGRRTLSPPTVTSS 596
R S + KA PGS A + ++ LSP + SS
Sbjct: 886 RPASQATSVKAEPGSIMAMSESSKKVLSPGELLSS 920
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.93
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 516 CGCRTCCAANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAAC 394
C C+TC + K C+ P + + R+PP T C
Sbjct: 435 CECKTCNSKTKCCFAQDD-GLCPYTLKHKIRVPPGTPIYEC 474
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 25.0 bits (52), Expect = 0.93
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 740 GHMVHCDSAEGHPEDPV 690
GHM H + GHP P+
Sbjct: 120 GHMGHTPTPNGHPSTPI 136
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 438 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 539
SN + P CH +IAC + K D R KT N
Sbjct: 354 SNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEEN 390
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 438 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 539
SN + P CH +IAC + K D R KT N
Sbjct: 354 SNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEEN 390
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 438 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 539
SN + P CH +IAC + K D R KT N
Sbjct: 65 SNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEEN 101
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 23.8 bits (49), Expect = 2.1
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2
Query: 745 PGVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVGRRTLSPPTVTSSVE 590
PG + A++ K R S + AS S TAS+ R+ P+V+ S E
Sbjct: 158 PGAAAAAALLSKR--RSVSECSLGTASSTSSTASSRNSDRSAGSPSVSESDE 207
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = +3
Query: 159 RLLKTTMGKISLFFLALIASSVMALYRVPLHRMKTA 266
R+++ +GK+ + + + V++LY P+ + A
Sbjct: 76 RVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAA 111
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 8.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 LSGFLSTDDVTVGGLKVRRPTFAEAVSEPGLAFV 677
LSG + V + ++P AVS PGLAF+
Sbjct: 328 LSGIVIFSVVGFMAHEQQKPVADVAVSGPGLAFL 361
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 8.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 727 TAIVLKAIPRIPSNLAATKASPGSDTASANVGRRTLSPPTVTS 599
TA LK I + + +ASP S AS + + S T+T+
Sbjct: 717 TAEQLKRTDIIHNYIMRGEASPRSPNASPSPAEQCASTTTITA 759
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,791
Number of Sequences: 438
Number of extensions: 5605
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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