Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_K13
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   2.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   8.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +2

Query: 215 TPTQVKDQPSVTFEAEADAFYTLVFTDPDNYDGPELVYREWHHWLVGNI 361
           TP  ++   S+    +  A   L+ +DP        VY +W HW   N+
Sbjct: 829 TPNLLRYFASIATNPKEQAQLNLLASDP-------AVYEDWRHWKFPNL 870


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 50  YFFWRSYRHDVLIMSLVAQAFEASK 124
           +F+WR Y   V     + Q F  +K
Sbjct: 265 FFYWRIYNAAVSTTKAINQGFRTTK 289


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 337 PFTVDQLRSIVVIRVREHERIKSISLGLKSDR 242
           PF VDQ R +  + V  ++ + S SL + S++
Sbjct: 70  PFDVDQWRGMTFVTVPRYKGVPS-SLNVISEK 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,612
Number of Sequences: 438
Number of extensions: 3774
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)